RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 EDDM3BP56851 147 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 AESQ08117 197 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 Q6ZTK2 550 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 GDPD3Q7L5L3 318 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 OR4M1Q8NGD0 313 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 RAB40AQ8WXH6 277 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 PHF21AQ96BD5 680 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 COQ2Q96H96 371 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 POM121Q96HA1 1249 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 FAAP24Q9BTP7 215 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 PECRQ9BY49 303 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 PLEKHJ1Q9NW61 149 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 MGST3O14880 152 aa13.01□□□□□ -0.33
DDX55-203ENST00000421670 CSN2P05814 226 aa13.01□□□□□ -0.33
DDX55-203ENST00000421670 NPY4RP50391 375 aa13.01□□□□□ -0.33
DDX55-203ENST00000421670 BTN2A1Q7KYR7 527 aa13.01□□□□□ -0.33
DDX55-203ENST00000421670 PPP1R35Q8TAP8 253 aa13.01□□□□□ -0.33
DDX55-203ENST00000421670 S100A16Q96FQ6 103 aaKnown RBP13.01□□□□□ -0.33
DDX55-203ENST00000421670 ELF5Q9UKW6 265 aaPredicted RBP13.01□□□□□ -0.33
DDX55-203ENST00000421670 KCNK7Q9Y2U2 307 aa13.01□□□□□ -0.33
DDX55-203ENST00000421670 ABCA1O95477 2261 aa13□□□□□ -0.33
DDX55-203ENST00000421670 A8MXK9 166 aa13□□□□□ -0.33
DDX55-203ENST00000421670 C22orf46C9J442 243 aa13□□□□□ -0.33
DDX55-203ENST00000421670 MFNGO00587 321 aa13□□□□□ -0.33
DDX55-203ENST00000421670 SCGNO76038 276 aa13□□□□□ -0.33
DDX55-203ENST00000421670 HIST1H1DP16402 221 aaKnown RBP13□□□□□ -0.33
DDX55-203ENST00000421670 GLIPR1P48060 266 aa13□□□□□ -0.33
DDX55-203ENST00000421670 RBM39Q14498 530 aaKnown RBP13□□□□□ -0.33
DDX55-203ENST00000421670 TMEM249Q2WGJ8 235 aa13□□□□□ -0.33
DDX55-203ENST00000421670 KRBOX4Q5JUW0 171 aa13□□□□□ -0.33
DDX55-203ENST00000421670 TMEM69Q5SWH9 247 aa13□□□□□ -0.33
DDX55-203ENST00000421670 OR5D13Q8NGL4 314 aa13□□□□□ -0.33
DDX55-203ENST00000421670 CMTM3Q96MX0 182 aa13□□□□□ -0.33
DDX55-203ENST00000421670 MMP27Q9H306 513 aa13□□□□□ -0.33
DDX55-203ENST00000421670 C19orf12Q9NSK7 152 aa13□□□□□ -0.33
DDX55-203ENST00000421670 ETAA1Q9NY74 926 aa13□□□□□ -0.33
DDX55-203ENST00000421670 AK3Q9UIJ7 227 aa13□□□□□ -0.33
DDX55-203ENST00000421670 HSF4Q9ULV5 492 aa13□□□□□ -0.33
DDX55-203ENST00000421670 TRAV18A0A075B6X5 111 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 TMEM235A6NFC5 223 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 H3BUI4 141 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 P2RX3P56373 397 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 RSBN1Q5VWQ0 802 aaPredicted RBP12.99□□□□□ -0.33
DDX55-203ENST00000421670 CNIH2Q6PI25 160 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 HDHD3Q9BSH5 251 aaPredicted RBP12.99□□□□□ -0.33
DDX55-203ENST00000421670 DCTN5Q9BTE1 182 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 DIABLOQ9NR28 239 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 EXTL2Q9UBQ6 330 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 KIF25Q9UIL4 384 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 A3GALT2U3KPV4 340 aa12.99□□□□□ -0.33
DDX55-203ENST00000421670 A0A0A6YYH2 397 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 A6NJ64 397 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 XRCC3O43542 346 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 FOXH1O75593 365 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 CLPXO76031 633 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 IGHV4-31P0DP07 118 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 PTHLHP12272 177 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 KCNJ3P48549 501 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 TAS2R20P59543 309 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 RPL31P62899 125 aaKnown RBP12.98□□□□□ -0.33
DDX55-203ENST00000421670 CDNFQ49AH0 187 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 ZNF497Q6ZNH5 498 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 FAM185AQ8N0U4 392 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 GCDHQ92947 438 aaPredicted RBP12.98□□□□□ -0.33
DDX55-203ENST00000421670 MSI2Q96DH6 328 aaKnown RBP12.98□□□□□ -0.33
DDX55-203ENST00000421670 COX4I2Q96KJ9 171 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 NUDT16L1Q9BRJ7 211 aaKnown RBP12.98□□□□□ -0.33
DDX55-203ENST00000421670 PTTG2Q9NZH5 202 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 RPUSD1Q9UJJ7 312 aaKnown RBP12.98□□□□□ -0.33
DDX55-203ENST00000421670 ADAM30Q9UKF2 790 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 LOC105371242A0A075B767 164 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 TRAV39A0A0B4J263 110 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 GPR37O15354 613 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 GLAP06280 429 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 MSMBP08118 114 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 ZNF260Q3ZCT1 412 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 SPNS3Q6ZMD2 512 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 TCF23Q7RTU1 214 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 C1orf159Q96HA4 380 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 DIRAS2Q96HU8 199 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 MMP26Q9NRE1 261 aa12.98□□□□□ -0.33
DDX55-203ENST00000421670 MRPS7Q9Y2R9 242 aaKnown RBP12.98□□□□□ -0.33
DDX55-203ENST00000421670 CSPG4Q6UVK1 2322 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 MEIKINA0A087WXM9 373 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 A0A1W2PQ09 198 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 TMEM30CPA0ZSE6 113 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 ODAMA1E959 279 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 B4DSR2 109 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 ZNF16P17020 682 aaPredicted RBP12.97□□□□□ -0.33
DDX55-203ENST00000421670 ERP29P30040 261 aaKnown RBP12.97□□□□□ -0.33
DDX55-203ENST00000421670 TNFSF8P32971 234 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 S100A5P33763 92 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 TALDO1P37837 337 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 PAX5Q02548 391 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 PAX2Q02962 417 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 ZNF273Q14593 569 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 CD276Q5ZPR3 534 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 LINC01356Q8N9X3 169 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 OR4K15Q8NH41 348 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 CCDC107Q8WV48 283 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms