RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 PSG11Q9UQ72 335 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 POMPQ9Y244 141 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 LSM4Q9Y4Z0 139 aaKnown RBP6.38□□□□□ -1.39
VIM-202ENST00000421459 U3KQK5 164 aa6.38□□□□□ -1.39
VIM-202ENST00000421459 PLECQ15149 4684 aaKnown RBP6.38□□□□□ -1.39
VIM-202ENST00000421459 A0A087X0M5 115 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 KBTBD11-OT1A0A1B0GTJ5 212 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 A0A1B0GX30 115 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 G3V2T6 193 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 J3QR06 171 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 CCL24O00175 119 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 IGKV1D-33P01593 117 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 IGKV1-33P01594 117 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 UBCP0CG48 685 aaKnown RBP6.37□□□□□ -1.39
VIM-202ENST00000421459 ZNF20P17024 532 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 PRKACBP22694 351 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 ATP6V1E1P36543 226 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 CEACAM3P40198 252 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 MNDAP41218 407 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 GLP1RP43220 463 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 REG1BP48304 166 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 ARHGDIBP52566 201 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 CDC42P60953 191 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 KDM4DQ6B0I6 523 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 UNQ9370/PRO34162Q6UXP9 181 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 LHFPL2Q6ZUX7 228 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 SLC35E3Q7Z769 313 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 GID4Q8IVV7 300 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 OR51D1Q8NGF3 324 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 OR9G1Q8NH87 305 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 UBALD1Q8TB05 177 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 PLPPR1Q8TBJ4 325 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 MRGPRDQ8TDS7 321 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 DNAJC9Q8WXX5 260 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 RPEQ96AT9 228 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 NRBF2Q96F24 287 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 OPALINQ96PE5 141 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 CIB1Q99828 191 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 COMMD4Q9H0A8 199 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 DCLRE1BQ9H816 532 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 CALYQ9NYX4 217 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 AASSQ9UDR5 926 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 WARS2Q9UGM6 360 aaKnown RBP6.37□□□□□ -1.39
VIM-202ENST00000421459 KIF25Q9UIL4 384 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 PCDHGB5Q9Y5G0 923 aa6.37□□□□□ -1.39
VIM-202ENST00000421459 MEIKINA0A087WXM9 373 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 TRAV24A0A0B4J272 114 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 ZNF729A6NN14 1252 aaPredicted RBP6.36□□□□□ -1.39
VIM-202ENST00000421459 H0YJX3 145 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 M0QZK8 103 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 SULT1C4O75897 302 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 OCM2P0CE71 109 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 OCMP0CE72 109 aaPredicted RBP6.36□□□□□ -1.39
VIM-202ENST00000421459 TMEM225BP0DP42 221 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 SSTR5P35346 364 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 ECI1P42126 302 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 ZP1P60852 638 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 ATP6AP1Q15904 470 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 TMEM244Q5VVB8 128 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 LPCAT4Q643R3 524 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 CCDC144NLQ6NUI1 221 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 UTS2BQ765I0 119 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 THNSL2Q86YJ6 484 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 ZNF695Q8IW36 515 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 STPG2Q8N412 459 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 OR13C3Q8NGS6 347 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 OR10K1Q8NGX5 313 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 CHPT1Q8WUD6 406 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 C10orf35Q96D05 121 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 MBOAT4Q96T53 435 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 MCRIP2Q9BUT9 160 aaKnown RBP6.36□□□□□ -1.39
VIM-202ENST00000421459 PRRG3Q9BZD7 231 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 RIBC2Q9H4K1 309 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 ZFP57Q9NU63 452 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 IDI2-AS1Q9NZ38 188 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 SCOCQ9UIL1 159 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 MYRFQ9Y2G1 1151 aa6.36□□□□□ -1.39
VIM-202ENST00000421459 FUOMA2VDF0 154 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 NCBP2LA6PVI3 153 aaKnown RBP6.35□□□□□ -1.39
VIM-202ENST00000421459 OOSP1A8MZH6 123 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 ZNF736B4DX44 427 aaPredicted RBP6.35□□□□□ -1.39
VIM-202ENST00000421459 J3QLW9 94 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 IGHG2P01859 326 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 CSN2P05814 226 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 NHLRC4P0CG21 123 aaPredicted RBP6.35□□□□□ -1.39
VIM-202ENST00000421459 ZNF19P17023 458 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 RIPK1Q13546 671 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 PIGYQ3MUY2 71 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 PAN3Q58A45 887 aaKnown RBP6.35□□□□□ -1.39
VIM-202ENST00000421459 FAM220AQ7Z4H9 259 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 MOB3BQ86TA1 216 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 CCDC54Q8NEL0 328 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 OR51T1Q8NGJ9 327 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 CREB3L1Q96BA8 519 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 SPSB1Q96BD6 273 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 RNFT2Q96EX2 444 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 CYYR1Q96J86 154 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 EAF1Q96JC9 268 aaPredicted RBP6.35□□□□□ -1.39
VIM-202ENST00000421459 HSPB9Q9BQS6 159 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 OSBPL10Q9BXB5 764 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms