RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 PHF21AQ96BD5 680 aa15.07■□□□□ 0
VARS2-202ENST00000421263 PPIL3Q9H2H8 161 aaKnown RBP15.07■□□□□ 0
VARS2-202ENST00000421263 TOR1AO14656 332 aa15.06■□□□□ 0
VARS2-202ENST00000421263 MPZL2O60487 215 aa15.06■□□□□ 0
VARS2-202ENST00000421263 LPLP06858 475 aa15.06■□□□□ 0
VARS2-202ENST00000421263 HCKP08631 526 aa15.06■□□□□ 0
VARS2-202ENST00000421263 LOXL3P58215 753 aa15.06■□□□□ 0
VARS2-202ENST00000421263 PAX5Q02548 391 aa15.06■□□□□ 0
VARS2-202ENST00000421263 RAB40BQ12829 278 aa15.06■□□□□ 0
VARS2-202ENST00000421263 ATXN7L3Q14CW9 347 aaPredicted RBP15.06■□□□□ 0
VARS2-202ENST00000421263 ASCL4Q6XD76 172 aa15.06■□□□□ 0
VARS2-202ENST00000421263 THNSL2Q86YJ6 484 aa15.06■□□□□ 0
VARS2-202ENST00000421263 ZNF565Q8N9K5 539 aa15.06■□□□□ 0
VARS2-202ENST00000421263 OR9G1Q8NH87 305 aa15.06■□□□□ 0
VARS2-202ENST00000421263 OR5AK2Q8NH90 309 aa15.06■□□□□ 0
VARS2-202ENST00000421263 SGCDQ92629 289 aa15.06■□□□□ 0
VARS2-202ENST00000421263 KIRREL1Q96J84 757 aa15.06■□□□□ 0
VARS2-202ENST00000421263 Q96MT0 163 aa15.06■□□□□ 0
VARS2-202ENST00000421263 PDCD1LG2Q9BQ51 273 aa15.06■□□□□ 0
VARS2-202ENST00000421263 AMBNQ9NP70 447 aa15.06■□□□□ 0
VARS2-202ENST00000421263 AURKAIP1Q9NWT8 199 aaPredicted RBP15.06■□□□□ 0
VARS2-202ENST00000421263 TRAV24A0A0B4J272 114 aa15.05■□□□□ -0
VARS2-202ENST00000421263 H0YJX3 145 aa15.05■□□□□ -0
VARS2-202ENST00000421263 PIN1P1O15428 100 aa15.05■□□□□ -0
VARS2-202ENST00000421263 CCDC159P0C7I6 412 aa15.05■□□□□ -0
VARS2-202ENST00000421263 FOXB2Q5VYV0 432 aa15.05■□□□□ -0
VARS2-202ENST00000421263 CNIH3Q8TBE1 160 aa15.05■□□□□ -0
VARS2-202ENST00000421263 CAPSLQ8WWF8 208 aa15.05■□□□□ -0
VARS2-202ENST00000421263 SLC29A1Q99808 456 aa15.05■□□□□ -0
VARS2-202ENST00000421263 ING3Q9NXR8 418 aa15.05■□□□□ -0
VARS2-202ENST00000421263 DHDHQ9UQ10 334 aa15.05■□□□□ -0
VARS2-202ENST00000421263 TSSC4Q9Y5U2 329 aaPredicted RBP15.05■□□□□ -0
VARS2-202ENST00000421263 NPIPB11E5RHQ5 1161 aa15.04■□□□□ -0
VARS2-202ENST00000421263 GABRPO00591 440 aa15.04■□□□□ -0
VARS2-202ENST00000421263 GBX2P52951 348 aaPredicted RBP15.04■□□□□ -0
VARS2-202ENST00000421263 IL13RA2Q14627 380 aa15.04■□□□□ -0
VARS2-202ENST00000421263 CCDC144NLQ6NUI1 221 aa15.04■□□□□ -0
VARS2-202ENST00000421263 OR52I1Q8NGK6 324 aa15.04■□□□□ -0
VARS2-202ENST00000421263 OR13A1Q8NGR1 328 aa15.04■□□□□ -0
VARS2-202ENST00000421263 MRAPQ8TCY5 172 aa15.04■□□□□ -0
VARS2-202ENST00000421263 HAVCR2Q8TDQ0 301 aa15.04■□□□□ -0
VARS2-202ENST00000421263 MYDGFQ969H8 173 aa15.04■□□□□ -0
VARS2-202ENST00000421263 KIF25Q9UIL4 384 aa15.04■□□□□ -0
VARS2-202ENST00000421263 LOC100130705A0A1B0GUX0 176 aa15.03■□□□□ -0
VARS2-202ENST00000421263 A0A1W2PRX2 142 aa15.03■□□□□ -0
VARS2-202ENST00000421263 TCRBV4S1A1TA0A5B7 111 aa15.03■□□□□ -0
VARS2-202ENST00000421263 J3QR06 171 aa15.03■□□□□ -0
VARS2-202ENST00000421263 M0QZK8 103 aa15.03■□□□□ -0
VARS2-202ENST00000421263 LIMS3P0CW19 117 aa15.03■□□□□ -0
VARS2-202ENST00000421263 LIMS4P0CW20 117 aa15.03■□□□□ -0
VARS2-202ENST00000421263 IGLL1P15814 213 aa15.03■□□□□ -0
VARS2-202ENST00000421263 CD33P20138 364 aa15.03■□□□□ -0
VARS2-202ENST00000421263 RAB3AP20336 220 aa15.03■□□□□ -0
VARS2-202ENST00000421263 NFYBP25208 207 aa15.03■□□□□ -0
VARS2-202ENST00000421263 C21orf33P30042 268 aaPredicted RBP15.03■□□□□ -0
VARS2-202ENST00000421263 MNDAP41218 407 aa15.03■□□□□ -0
VARS2-202ENST00000421263 OR3A4PP47883 348 aa15.03■□□□□ -0
VARS2-202ENST00000421263 RSBN1Q5VWQ0 802 aaPredicted RBP15.03■□□□□ -0
VARS2-202ENST00000421263 C10orf99Q6UWK7 81 aa15.03■□□□□ -0
VARS2-202ENST00000421263 CCDC121Q6ZUS5 278 aa15.03■□□□□ -0
VARS2-202ENST00000421263 OR51A2Q8NGJ7 313 aa15.03■□□□□ -0
VARS2-202ENST00000421263 APH1BQ8WW43 257 aa15.03■□□□□ -0
VARS2-202ENST00000421263 RGP1Q92546 391 aaPredicted RBP15.03■□□□□ -0
VARS2-202ENST00000421263 NR1H4Q96RI1 486 aaPredicted RBP15.03■□□□□ -0
VARS2-202ENST00000421263 C9orf16Q9BUW7 83 aa15.03■□□□□ -0
VARS2-202ENST00000421263 JAM3Q9BX67 310 aa15.03■□□□□ -0
VARS2-202ENST00000421263 BARHL1Q9BZE3 327 aa15.03■□□□□ -0
VARS2-202ENST00000421263 FAM118AQ9NWS6 357 aa15.03■□□□□ -0
VARS2-202ENST00000421263 CALYQ9NYX4 217 aa15.03■□□□□ -0
VARS2-202ENST00000421263 RPL36Q9Y3U8 105 aaKnown RBP15.03■□□□□ -0
VARS2-202ENST00000421263 MEIKINA0A087WXM9 373 aa15.02■□□□□ -0
VARS2-202ENST00000421263 SH2D7A6NKC9 451 aaPredicted RBP15.02■□□□□ -0
VARS2-202ENST00000421263 IL1AP01583 271 aa15.02■□□□□ -0
VARS2-202ENST00000421263 FAM106CPP0CH98 169 aa15.02■□□□□ -0
VARS2-202ENST00000421263 KCNJ3P48549 501 aa15.02■□□□□ -0
VARS2-202ENST00000421263 GTF2A1P52655 376 aaPredicted RBP15.02■□□□□ -0
VARS2-202ENST00000421263 KLHL22Q53GT1 634 aa15.02■□□□□ -0
VARS2-202ENST00000421263 PAN3Q58A45 887 aaKnown RBP15.02■□□□□ -0
VARS2-202ENST00000421263 SLC16A12Q6ZSM3 486 aa15.02■□□□□ -0
VARS2-202ENST00000421263 C10orf67Q8IYJ2 551 aa15.02■□□□□ -0
VARS2-202ENST00000421263 OR10A7Q8NGE5 316 aa15.02■□□□□ -0
VARS2-202ENST00000421263 OR4X2Q8NGF9 303 aa15.02■□□□□ -0
VARS2-202ENST00000421263 TSEN15Q8WW01 171 aaKnown RBP15.02■□□□□ -0
VARS2-202ENST00000421263 CPNE2Q96FN4 548 aaPredicted RBP15.02■□□□□ -0
VARS2-202ENST00000421263 FGF20Q9NP95 211 aaPredicted RBP15.02■□□□□ -0
VARS2-202ENST00000421263 PCDHB16Q9NRJ7 776 aa15.02■□□□□ -0
VARS2-202ENST00000421263 IDI2-AS1Q9NZ38 188 aa15.02■□□□□ -0
VARS2-202ENST00000421263 PSG11Q9UQ72 335 aa15.02■□□□□ -0
VARS2-202ENST00000421263 ZNF281Q9Y2X9 895 aa15.02■□□□□ -0
VARS2-202ENST00000421263 MAGEB3O15480 346 aa15.01□□□□□ -0.01
VARS2-202ENST00000421263 PF4V1P10720 104 aa15.01□□□□□ -0.01
VARS2-202ENST00000421263 RBM39Q14498 530 aaKnown RBP15.01□□□□□ -0.01
VARS2-202ENST00000421263 ZSCAN26Q16670 478 aa15.01□□□□□ -0.01
VARS2-202ENST00000421263 CCDC58Q4VC31 144 aa15.01□□□□□ -0.01
VARS2-202ENST00000421263 PLPPR1Q8TBJ4 325 aa15.01□□□□□ -0.01
VARS2-202ENST00000421263 TNFAIP8L1Q8WVP5 186 aa15.01□□□□□ -0.01
VARS2-202ENST00000421263 IFT22Q9H7X7 185 aa15.01□□□□□ -0.01
VARS2-202ENST00000421263 MOB4Q9Y3A3 225 aa15.01□□□□□ -0.01
VARS2-202ENST00000421263 AMMECR1Q9Y4X0 333 aaPredicted RBP15.01□□□□□ -0.01
VARS2-202ENST00000421263 HSPE1-MOB4S4R3N1 261 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms