RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 C5orf52A6NGY3 159 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 AQP7P3A6NL99 342 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 ZNF705GA8MUZ8 300 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 PROB1E7EW31 1015 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 CDPF1Q6NVV7 123 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 OPN5Q6U736 354 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 TMPRSS7Q7RTY8 843 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 ZNF561Q8N587 486 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 CYB561D1Q8N8Q1 229 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 LURAP1Q96LR2 239 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 DEFB127Q9H1M4 99 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 UBE2ZQ9H832 354 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 CRIM1Q9NZV1 1036 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 NSG2Q9Y328 171 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 SIT1Q9Y3P8 196 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 SMCO3A2RU48 225 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 SYNGR1O43759 233 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 CEBPDP49716 269 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 ALKBH6Q3KRA9 238 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 TRIM61Q5EBN2 209 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 WDR25Q64LD2 544 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 CMTM1Q8IZ96 169 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 HPSE2Q8WWQ2 592 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 TMEM204Q9BSN7 226 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 PHF7Q9BWX1 381 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 COL6A6A6NMZ7 2263 aa11.43□□□□□ -0.58
TNFRSF8-203ENST00000417814 ZNF729A6NN14 1252 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 CEBPZOSA8MTT3 80 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 SERPINE3A8MV23 424 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 E5RGE8 158 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 ARF1P84077 181 aaKnown RBP11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 RSPO1Q2MKA7 263 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 ZNF441Q8N8Z8 693 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 ADPRHL1Q8NDY3 354 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 CHST5Q9GZS9 411 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 TOLLIPQ9H0E2 274 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 BCO1Q9HAY6 547 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 PNRC2Q9NPJ4 139 aaKnown RBP11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 TGIF2-C20orf24A0A0A6YYL0 155 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 LOC390937A0A1W2PQ73 354 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 MSTNO14793 375 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 DEDDO75618 318 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 LINC00205P59089 165 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 VAX1Q5SQQ9 334 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 HIST2H3PS2Q5TEC6 136 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 ZNF100Q8IYN0 542 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 ZNF383Q8NA42 475 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 COLCA2A8K830 154 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 SNRPCP09234 159 aaKnown RBP11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 CA6P23280 308 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 CASP6P55212 293 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 EWSR1Q01844 656 aaKnown RBP eCLIP11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 OR2C3Q8N628 320 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 GGACTQ9BVM4 153 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 HINT2Q9BX68 163 aa11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 CHCHD2Q9Y6H1 151 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF8-203ENST00000417814 MAP1AP78559 2803 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 IGHV3-43A0A0B4J1X8 118 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 C3orf85A0A1B0GTC6 90 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 KRASP01116 189 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 PPYP01298 95 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 IGHV3-43DP0DP04 118 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 EGR1P18146 543 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 CHATP28329 748 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 PTGDSP41222 190 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 FOLR3P41439 243 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 ADIRFQ15847 76 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 OCSTAMPQ9BR26 566 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 DCAF16Q9NXF7 216 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 IGKV1D-13A0A0B4J2D9 117 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 CXorf65A6NEN9 183 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 KIAA1324LA8MWY0 1029 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 IGKV1-13P0DP09 117 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 RAB5AP20339 215 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 CNN3Q15417 329 aaKnown RBP11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 DPPA2Q7Z7J5 298 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 TUSC5Q8IXB3 177 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 THOC3Q96J01 351 aaKnown RBP11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 PBDC1Q9BVG4 233 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 FIGNL2A6NMB9 653 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 TRAPPC2LH3BP13 241 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 UBE2CO00762 179 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 FABP4P15090 132 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 SULT1A2P50226 295 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 IL34Q6ZMJ4 242 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 DMRTC2Q8IXT2 367 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 SCGB1C1Q8TD33 95 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 RHBDD1Q8TEB9 315 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 PSMF1Q92530 271 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 AQP10Q96PS8 301 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 GFOD1Q9NXC2 390 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 GAB2Q9UQC2 676 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 HS3ST3B1Q9Y662 390 aa11.41□□□□□ -0.58
TNFRSF8-203ENST00000417814 FGF16O43320 207 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 ZIC3O60481 467 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 NDUFB7P17568 137 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 THBS4P35443 961 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 ZNF816Q0VGE8 651 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 ZP4Q12836 540 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 PNLIPRP3Q17RR3 467 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms