RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CD59P13987 128 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 GTF2E2P29084 291 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 CMPK1P30085 196 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 CA5AP35218 305 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 SAA4P35542 130 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 POLR2IP36954 125 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 RECQLP46063 649 aaPredicted RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 TUFMP49411 452 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 CRYBB1P53674 252 aaPredicted RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 AP2S1P53680 142 aaPredicted RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 TPD52P55327 224 aaPredicted RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 MAP3K7CLP57077 242 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 UBE2NP61088 152 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 RPL27P61353 136 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 ATP5G2Q06055 141 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 SCN1BQ07699 218 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 ITKQ08881 620 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 CDH17Q12864 832 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 DYNC1I2Q13409 638 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 FAM174BQ3ZCQ3 159 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 MPPE1Q53F39 396 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 CHCHD2P9Q5T1J5 151 aaPredicted RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 PRAMEF5Q5TYX0 476 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 PRAMEF6Q5VXH4 476 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 KDM4DQ6B0I6 523 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 MZT2BQ6NZ67 158 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 LYZL1Q6UWQ5 148 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 ZNF818PQ6ZRF7 136 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 BZW1Q7L1Q6 419 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 ADCK2Q7Z695 626 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 SPATA12Q7Z6I5 190 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 PIGWQ7Z7B1 504 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 TAF8Q7Z7C8 310 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 SLC25A29Q8N8R3 303 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 HSD17B11Q8NBQ5 300 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR8S1Q8NH09 359 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR51H1Q8NH63 302 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 SLC35G2Q8TBE7 412 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 SFT2D1Q8WV19 159 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 UFD1Q92890 307 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 ISG20Q96AZ6 181 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 THOC1Q96FV9 657 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 SEC22AQ96IW7 307 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 LINC00052Q96N35 136 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR6C1Q96RD1 312 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 VAT1Q99536 393 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 NIPSNAP1Q9BPW8 284 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 CCDC134Q9H6E4 229 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 VCPKMTQ9H867 229 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 DBNDD1Q9H9R9 158 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 TMEM27Q9HBJ8 222 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 MRPS30Q9NP92 439 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 CMTM6Q9NX76 183 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 TMOD2Q9NZR1 351 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 MTFP1Q9UDX5 166 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 NOSIPQ9Y314 301 aaKnown RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 GPR45Q9Y5Y3 372 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 NRXN2Q9P2S2 1712 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 IGHV3-73A0A0B4J1V6 119 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 IGHV3-43A0A0B4J1X8 118 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 C20orf202A1L168 122 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR6C74A6NCV1 312 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 EFCAB8A8MWE9 144 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 F8WEM9 126 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 LYNX1G3V0Z9 82 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 ATP8B1O43520 1251 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 KLRC4O43908 158 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 SULT1C4O75897 302 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 AHSA1O95433 338 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 RAB3DO95716 219 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 CXorf1O96002 111 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 PDYNP01213 254 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 MT-ND4P03905 459 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 GAPDHP04406 335 aaKnown RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 ATP5G1P05496 136 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 PYGLP06737 847 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 SMIM18P0DKX4 95 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 ALDH3A1P30838 453 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 UGT2B10P36537 528 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 MTIF2P46199 727 aaKnown RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 NPY2RP49146 381 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 HSD17B7P56937 341 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 SCAND1P57086 179 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 SNRPD3P62318 126 aaKnown RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 RHOGP84095 191 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 FANCCQ00597 558 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 HLTFQ14527 1009 aaKnown RBP eCLIP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 FXYD3Q14802 87 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 ARL6IP1Q15041 203 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 GOLGA7BQ2TAP0 167 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 C18orf21Q32NC0 220 aaPredicted RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 PCGF3Q3KNV8 242 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 LINC00303Q3SY05 128 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 C6orf141Q5SZD1 244 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 RARS2Q5T160 578 aaKnown RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 TIGD3Q6B0B8 471 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 PVRIGQ6DKI7 326 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 SDCCAG8Q86SQ7 713 aaPredicted RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 PHF13Q86YI8 300 aaPredicted RBP-2.36□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms