RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 MCRIP1C9JLW8 97 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 FCER2P06734 321 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 LMO1P25800 156 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 PTBP1P26599 531 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 RNASE12Q5GAN4 147 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 BTN2A1Q7KYR7 527 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 GDPD3Q7L5L3 318 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 C5orf24Q7Z6I8 188 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 LINC00596Q86U02 117 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 OR8H2Q8N162 312 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 CCDC107Q8WV48 283 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 PTX4Q96A99 478 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 PHF21AQ96BD5 680 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 MRI1Q9BV20 369 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 DNTTIP1Q9H147 329 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 C19orf12Q9NSK7 152 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 RCC2Q9P258 522 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 EXTL2Q9UBQ6 330 aa11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 MRPS7Q9Y2R9 242 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-204ENST00000409323 TMEM235A6NFC5 223 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 SCAND1P57086 179 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 PRB3Q04118 309 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 LOXL1Q08397 574 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 KRBOX4Q5JUW0 171 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 CNIH2Q6PI25 160 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM185AQ8N0U4 392 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 OR4K15Q8NH41 348 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 UBALD1Q8TB05 177 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 S100A16Q96FQ6 103 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 ABCG5Q9H222 651 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 MMP26Q9NRE1 261 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 ETAA1Q9NY74 926 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 AK3Q9UIJ7 227 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 KIF25Q9UIL4 384 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 V9GYH0 126 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 AKAP9Q99996 3911 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 CELSR1Q9NYQ6 3014 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 MEIS3P1A6NDR6 274 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A10PA6NDY2 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A18PA6NE21 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A16PA6NEW6 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A20PA6NIJ5 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A8PA6NJQ4 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A7PA6NKC0 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A22PA8MWA6 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A12PA8MX19 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A5PA8MXJ8 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A23PA8MXZ1 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 APOA1P02647 267 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A15PP0C7V4 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A13PP0C7W8 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A14PP0C7W9 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM90A24PP0C7X0 464 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 HIST1H1DP16402 221 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 RANBP1P43487 201 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 DLX1P56177 255 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 ERVFRD-1P60508 538 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 TMEM249Q2WGJ8 235 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 CDNFQ49AH0 187 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 SPANXN2Q5MJ10 180 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 TMEM69Q5SWH9 247 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 SNX29P2Q8IUI4 249 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 NUDCD2Q8WVJ2 157 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 DIRAS2Q96HU8 199 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 SDHCQ99643 169 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 IFT22Q9H7X7 185 aa11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 ZNF469Q96JG9 3925 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-204ENST00000409323 FLNAP21333 2647 aaKnown RBP11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 J3QRK9 145 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 MFNGO00587 321 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 MGST3O14880 152 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 HEXAP06865 529 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 IGHV4-31P0DP07 118 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 TAS2R20P59543 309 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 IFITM3Q01628 133 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 GUCA2AQ02747 115 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 ZNF273Q14593 569 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 RSBN1Q5VWQ0 802 aaPredicted RBP11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 Q6ZPA2 131 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 TCF23Q7RTU1 214 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 SETD6Q8TBK2 473 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 RAB40AQ8WXH6 277 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 MAFIPQ8WZ33 124 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 MSI2Q96DH6 328 aaKnown RBP11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 SMR3AQ99954 134 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 DIABLOQ9NR28 239 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 ABCA1O95477 2261 aa11.66□□□□□ -0.54
CHRNA1-204ENST00000409323 ACANP16112 2415 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 CREBBPQ92793 2442 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 LOC105371242A0A075B767 164 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 MEIKINA0A087WXM9 373 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 A0A1W2PQ09 198 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 CCL3L1P16619 93 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 ZNF16P17020 682 aaPredicted RBP11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 GLP1RP43220 463 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 RPL31P62899 125 aaKnown RBP11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 ZNF260Q3ZCT1 412 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 TRAPPC6BQ86SZ2 158 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 OR5D13Q8NGL4 314 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 PPP1R35Q8TAP8 253 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms