RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 COLCA2A8K830 154 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 LDLRAD4O15165 306 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 SYNGR1O43759 233 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 MRPL33O75394 65 aaKnown RBP7.22□□□□□ -1.25
SNX13-201ENST00000409076 CRYAAP02489 173 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 CELA3AP09093 270 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 SSR4P51571 173 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 ZNF100Q8IYN0 542 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 PHYHIPLQ96FC7 376 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 UTP23Q9BRU9 249 aaKnown RBP7.22□□□□□ -1.25
SNX13-201ENST00000409076 NOSIPQ9Y314 301 aaKnown RBP7.22□□□□□ -1.25
SNX13-201ENST00000409076 WSB1Q9Y6I7 421 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 IGKV1-12A0A0C4DH73 117 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 IGSF23A1L1A6 192 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 CD300LBA8K4G0 201 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 IGKV1D-12P01611 117 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 OPN1MWP04001 364 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 OPN1MW2P0DN77 364 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 OPN1MW3P0DN78 364 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 CA6P23280 308 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 CCR5P51681 352 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 RAB30Q15771 203 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 IL34Q6ZMJ4 242 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 PSMF1Q92530 271 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 MRGPRX4Q96LA9 322 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 NIPSNAP3BQ9BS92 247 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 EDEM2Q9BV94 578 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 TRAPPC2LQ9UL33 140 aa7.22□□□□□ -1.25
SNX13-201ENST00000409076 MGAQ8IWI9 3026 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 INTS1Q8N201 2190 aaKnown RBP7.21□□□□□ -1.25
SNX13-201ENST00000409076 C3orf85A0A1B0GTC6 90 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 TRAPPC2LH3BP13 241 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 DEDDO75618 318 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 IL2RAP01589 272 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 CXCL12P48061 93 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 UQCC3Q6UW78 93 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 MAFAQ8NHW3 353 aaPredicted RBP7.21□□□□□ -1.25
SNX13-201ENST00000409076 CDCA3Q99618 268 aaPredicted RBP7.21□□□□□ -1.25
SNX13-201ENST00000409076 FOXB1Q99853 325 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 TOLLIPQ9H0E2 274 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 VSIRQ9H7M9 311 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 CRIM1Q9NZV1 1036 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 LAMP3Q9UQV4 416 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 OSGIN2Q9Y236 505 aa7.21□□□□□ -1.25
SNX13-201ENST00000409076 A0A1B0GV90 55 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 PPYP01298 95 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 CALCRP30988 508 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 CHRNA7P36544 502 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 SULT1A2P50226 295 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 MED12LQ86YW9 2145 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 ZNF561Q8N587 486 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 OR1F12Q8NHA8 337 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 BCO1Q9HAY6 547 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 CACFD1Q9UGQ2 172 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 IGKV1D-13A0A0B4J2D9 117 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 PPP1R2P9O14990 202 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 HOXC4P09017 264 aaPredicted RBP7.21□□□□□ -1.26
SNX13-201ENST00000409076 IGKV1-13P0DP09 117 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 PSG2P11465 335 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 SSBP1Q04837 148 aaKnown RBP7.21□□□□□ -1.26
SNX13-201ENST00000409076 CNN3Q15417 329 aaKnown RBP7.21□□□□□ -1.26
SNX13-201ENST00000409076 DHRS7BQ6IAN0 325 aaPredicted RBP7.21□□□□□ -1.26
SNX13-201ENST00000409076 ZNF600Q6ZNG1 722 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 SYT13Q7L8C5 426 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 D2HGDHQ8N465 521 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 OR10D3Q8NH80 312 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 TVP23CQ96ET8 276 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 SSX3Q99909 188 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 SLC35B3Q9H1N7 401 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 CACNG5Q9UF02 275 aa7.21□□□□□ -1.26
SNX13-201ENST00000409076 IGHV5-10-1A0A0J9YXX1 117 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 DVL1O14640 695 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 CXCL1P09341 107 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 PGA5P0DJD9 388 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 CD33P20138 364 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 COL8A2P25067 703 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 RND3P61587 244 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ARG2P78540 354 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ARF1P84077 181 aaKnown RBP7.2□□□□□ -1.26
SNX13-201ENST00000409076 PSG4Q00888 419 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 LYSMD4Q5XG99 296 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ZNF818PQ6ZRF7 136 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ZDHHC23Q8IYP9 409 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ARHGEF39Q8N4T4 335 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 CNEP1R1Q8N9A8 125 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 SMRP1Q8NCR6 262 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 RBFOX3A6NFN3 312 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ZNF705FA8MVS1 300 aaPredicted RBP7.2□□□□□ -1.26
SNX13-201ENST00000409076 CYTIPO60759 359 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ISG15P05161 165 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ZNF705DP0CH99 300 aaPredicted RBP7.2□□□□□ -1.26
SNX13-201ENST00000409076 ZNF705BP0CI00 300 aaPredicted RBP7.2□□□□□ -1.26
SNX13-201ENST00000409076 SNCAP37840 140 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 QRFPP83859 136 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ENDOGQ14249 297 aaKnown RBP7.2□□□□□ -1.26
SNX13-201ENST00000409076 C21orf62-AS1Q17RA5 79 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 HIKESHIQ53FT3 197 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 ZNF787Q6DD87 383 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 SKA3Q8IX90 412 aa7.2□□□□□ -1.26
SNX13-201ENST00000409076 IL22RA1Q8N6P7 574 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms