RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 KCNE4Q8WWG9 221 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 GMPPAQ96IJ6 420 aaPredicted RBP12.05□□□□□ -0.48
DDX3X-201ENST00000399959 P2RX4Q99571 388 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 SLC52A3Q9NQ40 469 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 CXCL13O43927 109 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 FAM157BP0CG42 384 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 OPRK1P41145 380 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 GNG3P63215 75 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 RIGQ13278 110 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 HERPUD1Q15011 391 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 CD207Q9UJ71 328 aa12.05□□□□□ -0.48
DDX3X-201ENST00000399959 HOXA5P20719 270 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 ZFP36L2P47974 494 aaKnown RBP12.04□□□□□ -0.48
DDX3X-201ENST00000399959 ZP1P60852 638 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 RND3P61587 244 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 ZNF77Q15935 545 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 BADQ92934 168 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 TMEM56Q96MV1 263 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 FOXB1Q99853 325 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 A0A1W2PN81 502 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 PLPP3O14495 311 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 HAND1O96004 215 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 MELTFP08582 738 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 NMUP48645 174 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 OR1D5P58170 312 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 SRSF9Q13242 221 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX3X-201ENST00000399959 VAX1Q5SQQ9 334 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 FNDC7Q5VTL7 733 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 FLRT3Q9NZU0 649 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 H0Y8X5 98 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 MYOGP15173 224 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 NANOS3P60323 173 aaKnown RBP12.04□□□□□ -0.48
DDX3X-201ENST00000399959 ISXQ2M1V0 245 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 Q6ZNB5 142 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 SLC25A38Q96DW6 304 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 TUBD1Q9UJT1 453 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 SF3B6Q9Y3B4 125 aaKnown RBP12.04□□□□□ -0.48
DDX3X-201ENST00000399959 ARID1AO14497 2285 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 DDX60LQ5H9U9 1706 aaKnown RBP12.04□□□□□ -0.48
DDX3X-201ENST00000399959 TMEM265A0A087WTH1 108 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 IGSF23A1L1A6 192 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 CTSVO60911 334 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 MEF2BQ02080 365 aaPredicted RBP12.04□□□□□ -0.48
DDX3X-201ENST00000399959 MRPL58Q14197 206 aaKnown RBP12.04□□□□□ -0.48
DDX3X-201ENST00000399959 CEACAM16Q2WEN9 425 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 ALKBH3Q96Q83 286 aaPredicted RBP12.04□□□□□ -0.48
DDX3X-201ENST00000399959 HSD17B10Q99714 261 aaKnown RBP12.04□□□□□ -0.48
DDX3X-201ENST00000399959 R3HDMLQ9H3Y0 253 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 PSG11Q9UQ72 335 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 KCNK7Q9Y2U2 307 aa12.04□□□□□ -0.48
DDX3X-201ENST00000399959 GGTLC2Q14390 218 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 PDPNQ86YL7 162 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 CDCA3Q99618 268 aaPredicted RBP12.03□□□□□ -0.48
DDX3X-201ENST00000399959 MRPL18Q9H0U6 180 aaKnown RBP12.03□□□□□ -0.48
DDX3X-201ENST00000399959 OR2W5A6NFC9 320 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 DHRS7CA6NNS2 312 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 PPP1CCP36873 323 aaKnown RBP12.03□□□□□ -0.48
DDX3X-201ENST00000399959 SLC35E4Q6ICL7 350 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 MVB12AQ96EY5 273 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 IP6K3Q96PC2 410 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 CCL28Q9NRJ3 127 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 ZNF205O95201 554 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 DANCRP0C864 163 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 HIST1H1EP10412 219 aaKnown RBP12.03□□□□□ -0.48
DDX3X-201ENST00000399959 S100A4P26447 101 aaKnown RBP12.03□□□□□ -0.48
DDX3X-201ENST00000399959 OR5A2Q8NGI9 324 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 CCL4L1Q8NHW4 92 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 OR2V2Q96R30 315 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 PARLQ9H300 379 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 ZNF665Q9H7R5 613 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 HCFC2Q9Y5Z7 792 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 MRPS18BQ9Y676 258 aaKnown RBP12.03□□□□□ -0.48
DDX3X-201ENST00000399959 EFNB1P98172 346 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 Q5PR19 223 aa12.03□□□□□ -0.48
DDX3X-201ENST00000399959 CISD1Q9NZ45 108 aaKnown RBP12.03□□□□□ -0.48
DDX3X-201ENST00000399959 B4E171 279 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 FZD5Q13467 585 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 OR10S1Q8NGN2 331 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 EID2BQ96D98 161 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 NDUFAF3Q9BU61 184 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 OR2T8A6NH00 312 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 CEACAM5P06731 702 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 MPLP40238 635 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 KIR2DS2P43631 304 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 LGALS4P56470 323 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 APCDD1LQ8NCL9 501 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 RNF186Q9NXI6 227 aa12.02□□□□□ -0.48
DDX3X-201ENST00000399959 OR4C46A6NHA9 309 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 PRRT4C9JH25 899 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 SAPCD1Q5SSQ6 148 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 TMEM252Q8N6L7 170 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 DEFB108BQ8NET1 73 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 SPPL3Q8TCT6 385 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 SSMEM1Q8WWF3 244 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 SAP30LQ9HAJ7 183 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 AP5S1Q9NUS5 200 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 GPR132Q9UNW8 380 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 PPIL1Q9Y3C6 166 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 PLPPR2Q96GM1 343 aa12.02□□□□□ -0.49
DDX3X-201ENST00000399959 ADTRPQ96IZ2 230 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms