RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 BCDIN3DQ7Z5W3 292 aaKnown RBP9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 RNF141Q8WVD5 230 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 FAM186AA6NE01 2351 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 PHIPQ8WWQ0 1821 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 MELTFP08582 738 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 RPS27P42677 84 aaKnown RBP9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 MEIG1Q5JSS6 88 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 FAM71E1Q6IPT2 247 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 SHISA5Q8N114 240 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 NANOGP1Q8N7R0 232 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 TP53I13Q8NBR0 393 aaPredicted RBP9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 ADAMTS17Q8TE56 1095 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 NEIL1Q96FI4 390 aaPredicted RBP9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 PKMYT1Q99640 499 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 SLC25A32Q9H2D1 315 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 C20orf141Q9NUB4 165 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 RNF115Q9Y4L5 304 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 LANCL1O43813 399 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 OR4A47Q6IF82 309 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 MMP25Q9NPA2 562 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 HOXD4P09016 255 aaPredicted RBP9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 REG1BP48304 166 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 MEOX2P50222 304 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 TMEM128Q5BJH2 165 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 NIPSNAP1Q9BPW8 284 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 SPNS1Q9H2V7 528 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 IGLV3-10A0A075B6K4 115 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 A0A1W2PPC1 479 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 CST4P01036 141 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 LGALSLQ3ZCW2 172 aaPredicted RBP9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 CALHM1Q8IU99 346 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 GUCD1Q96NT3 240 aa9.71□□□□□ -0.86
CACNA1C-216ENST00000399638 CACNA1CQ13936 2221 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 PYCARD-AS1I3L0S3 204 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 ATP1B1P05026 303 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 GALR1P47211 349 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 TGIF1Q15583 401 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 ACER3Q9NUN7 267 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 SAXO2Q658L1 398 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 OR8I2Q8N0Y5 310 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 C16orf92Q96LL3 132 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 DXOO77932 396 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 MRPS11P82912 194 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 OR4X2Q8NGF9 303 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 TMEM18Q96B42 140 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 PAPPA2Q9BXP8 1791 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 IGKV3D-20A0A0C4DH25 116 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 PSMB11A5LHX3 300 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 CDRT15L2A8MXV6 281 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 METAP1P53582 386 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 FAM26EQ8N5C1 309 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 MS4A10Q96PG2 267 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 IL21Q9HBE4 155 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 F11RQ9Y624 299 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 GAGE10A6NGK3 116 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 MMP15P51511 669 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 NSUN5P2Q63ZY6 315 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 KLHDC8BQ8IXV7 354 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 OR52N4Q8NGI2 321 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 FAM168AQ92567 244 aa9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 TMEFF2Q9UIK5 374 aaPredicted RBP9.7□□□□□ -0.86
CACNA1C-216ENST00000399638 A0A087WUJ7 227 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 GIPP09681 153 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 HIST1H1EP10412 219 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 FGF8P55075 233 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 ZXDCQ2QGD7 858 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 FAAP20Q6NZ36 180 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 RPUSD3Q6P087 351 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 SLC25A42Q86VD7 318 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 C1orf174Q8IYL3 243 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 TTTY12Q9BZ98 90 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 NAA60Q9H7X0 242 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 RCL1Q9Y2P8 373 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 TRAV12-3A0A0B4J271 114 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 WNT1P04628 370 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 IL4P05112 153 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 COX5AP20674 150 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 RPS19P39019 145 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 RPEL1Q2QD12 228 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 SSX8Q7RTT4 187 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 STXBP6Q8NFX7 210 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 NT5CQ8TCD5 201 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 STAG3L2P0CL84 134 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 SPI1P17947 270 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 ARF6P62330 175 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 ZNF680Q8NEM1 530 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 STARD4Q96DR4 205 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 NRAPQ86VF7 1730 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 CLEC2LP0C7M8 214 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 ZP3P21754 424 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 C20orf196Q8IYI0 205 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 TMED3Q9Y3Q3 217 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 ST8SIA3O43173 380 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 CDK2AP2O75956 126 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 TCRBP04435 133 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 RAB9AP51151 201 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 CSRP2Q16527 193 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 OR1P1Q8NH06 330 aa9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 WDR89Q96FK6 387 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-216ENST00000399638 FCN2Q15485 313 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms