RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-211ENST00000399617 COL4A1P02462 1669 aa12.07□□□□□ -0.48
CACNA1C-211ENST00000399617 ZNF638Q14966 1978 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-211ENST00000399617 SLC17A2O00624 439 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 OR2C1O95371 312 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 FABP4P15090 132 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 TIAL1Q01085 375 aaKnown RBP eCLIP12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 CSN3P07498 182 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 COX6A1P12074 109 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 PLPPR5Q32ZL2 321 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 ANKRD31Q8N7Z5 1873 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 ZNF714Q96N38 554 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 VWA1Q6PCB0 445 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 OR8D4Q8NGM9 314 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 SF3B5Q9BWJ5 86 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 PIGMQ9H3S5 423 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 IGHV3OR16-13A0A075B7E8 117 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 IGHV3-74A0A0B4J1X5 117 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 TGFAP01135 160 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 EMP1P54849 157 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 PPP1R1CQ8WVI7 109 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 ABHD14BQ96IU4 210 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 SRXN1Q9BYN0 137 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 UQCC1Q9NVA1 299 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 METTL1Q9UBP6 276 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 RNASEK-C17orf49H0YIS7 233 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 CEACAM1P13688 526 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 SLC25A1P53007 311 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 NSUN5P1Q3KNT7 163 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 CD276Q5ZPR3 534 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 OR5B21A6NL26 309 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 H7BYZ3 331 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 NEURL1O76050 574 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 PCMT1P22061 227 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 ACP1P24666 158 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 ROM1Q03395 351 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 UNQ5815/PRO19632Q6UWF5 114 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 MRM2Q9UI43 246 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 SPAG17Q6Q759 2223 aa12.06□□□□□ -0.48
CACNA1C-211ENST00000399617 G3V3Q6 166 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 PSG4Q00888 419 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 A0A1W2PPQ1 181 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 LTBRP36941 435 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 SLC35B1P78383 322 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 SNX22Q96L94 193 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 MRM1Q6IN84 353 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 Q71RC1 249 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 OR4S2Q8NH73 311 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 WDR89Q96FK6 387 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 DUX5Q96PT3 197 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 KIAA1551Q9HCM1 1747 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 SNCGO76070 127 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 PTTG1IPP53801 180 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 FAM201AQ5SY85 155 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 MUC15Q8N387 334 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 C12orf10Q9HB07 376 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 TMEM229AB2RXF0 380 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 CDK5Q00535 292 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 SLC24A4Q8NFF2 622 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 MARC2Q969Z3 335 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 RYDENQ9NUL5 291 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 KCNJ3P48549 501 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 CAMPP49913 170 aa12.05□□□□□ -0.48
CACNA1C-211ENST00000399617 LOC105371242A0A075B767 164 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 AHRRA9YTQ3 701 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 SLC51BQ86UW2 128 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 MSRB3Q8IXL7 192 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 GAPTQ8N292 157 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 SCN1AP35498 2009 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 TCL1AP56279 114 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 VAMP3Q15836 100 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 FAHD1Q6P587 224 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 STXBP6Q8NFX7 210 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 ZNF552Q9H707 407 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 BGLAPP02818 100 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 PMCHP20382 165 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 ERVFRD-1P60508 538 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 HGDQ93099 445 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 FKBP11Q9NYL4 201 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 IL20Q9NYY1 176 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 BRWD3Q6RI45 1802 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 KIR2DS2P43631 304 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 HMGN3Q15651 99 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 PNLIPRP3Q17RR3 467 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 RNASEKQ6P5S7 137 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 RFLNBQ8N5W9 214 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 Q8WTZ3 238 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 PLAUP00749 431 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 FGF5P12034 268 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 GNPNAT1Q96EK6 184 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 ZNF385DQ9H6B1 395 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 PPIAL4CA0A0B4J2A2 164 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 IGHV3-48P01763 117 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 PPIAL4GP0DN37 164 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 POLR2GP62487 172 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms