RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 IGHA1P01876 353 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 CSN2P05814 226 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR8U9P0C7N5 309 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 NUTF2P61970 127 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 MRPS21P82921 87 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 LTBQ06643 244 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 EIPR1Q53HC9 387 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 SLC35F2Q8IXU6 374 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZSCAN4Q8NAM6 433 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR10C1Q96KK4 312 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 PGLYRP3Q96LB9 341 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 C1QTNF6Q9BXI9 259 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 ACTR3CQ9C0K3 210 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZNF665Q9H7R5 613 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 VPREB3Q9UKI3 123 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 VDAC3Q9Y277 283 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 SLC35A3Q9Y2D2 325 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 PTPRZ1P23471 2315 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 IGKV1D-42A0A075B6H8 117 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 G3V4G9 280 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 PIN1P1O15428 100 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR2B3O76000 313 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 HLA-AP01891 365 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 ARR3P36575 388 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 IKZF1Q13422 519 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR1C1Q15619 314 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 NSDHLQ15738 373 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR10K2Q6IF99 312 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 ANKRD37Q7Z713 158 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 MS4A15Q8N5U1 240 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR8S1Q8NH09 359 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 C11orf40Q8WZ69 217 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 NUDT9Q9BW91 350 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 WFDC1Q9HC57 220 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 ELF5Q9UKW6 265 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 POMT2Q9UKY4 750 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 MMP17Q9ULZ9 603 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 ATMQ13315 3056 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 A0A0G2JK05 382 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 SERINC4A6NH21 518 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZNF354AO60765 605 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 EIF3GO75821 320 aaKnown RBP eCLIP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 SCO1O75880 301 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 HLA-DOBP13765 273 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 IRF2P14316 349 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 FOLR1P15328 257 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 SPI1P17947 270 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 RAB3BP20337 219 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 MEOX1P50221 254 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 RAB38P57729 211 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 PPP3R1P63098 170 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 SRYQ05066 204 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 FMODQ06828 376 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 ASAH1Q13510 395 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 SNAI3Q3KNW1 292 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 B3GNTL1Q67FW5 361 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 FAM19A1Q7Z5A9 133 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 RGP1Q92546 391 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 SFRP2Q96HF1 295 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 SLC6A7Q99884 636 aa5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 RCC2Q9P258 522 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR2M5A3KFT3 312 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 SMIM9A6NGZ8 99 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 K7EP13 123 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 FABP7O15540 132 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 HOXA3O43365 443 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 EIF4E2O60573 245 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 SIX6O95475 246 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 IGHG3P01860 377 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 F8A1P23610 371 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 KIR2DS4P43632 304 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 CLDN20P56880 219 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 DEFA6Q01524 100 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 TAL2Q16559 108 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 LPAL2Q16609 132 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 ATP6V1FQ16864 119 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 KIAA0895LQ68EN5 471 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 GDPGP1Q6ZNW5 385 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 CMTM1Q8IZ96 169 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR2T4Q8NH00 348 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 EMC6Q9BV81 110 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 PPA2Q9H2U2 334 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 TMEM138Q9NPI0 162 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 RBFOX1Q9NWB1 397 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 KLHL13Q9P2N7 655 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 LAMP3Q9UQV4 416 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 EML5Q05BV3 1969 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 DNAJC13O75165 2243 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 TRAV8-7A0A075B6U6 113 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 LOC101059948A0A1B0GTJ6 334 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 LMX1BO60663 402 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 NDUFB2O95178 105 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 ISG15P05161 165 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 AKR1C4P17516 323 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 RPL18Q07020 188 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 GAGE13Q4V321 117 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms