RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 H3BML4 177 aa11.37□□□□□ -0.59
CCBE1-201ENST00000398179 PPP1R3DO95685 299 aa11.37□□□□□ -0.59
CCBE1-201ENST00000398179 ALOX5APP20292 161 aa11.37□□□□□ -0.59
CCBE1-201ENST00000398179 EGR3Q06889 387 aa11.37□□□□□ -0.59
CCBE1-201ENST00000398179 SGMS2Q8NHU3 365 aa11.37□□□□□ -0.59
CCBE1-201ENST00000398179 C1QTNF4Q9BXJ3 329 aa11.37□□□□□ -0.59
CCBE1-201ENST00000398179 SNHG12Q9BXW3 62 aa11.37□□□□□ -0.59
CCBE1-201ENST00000398179 GPR88Q9GZN0 384 aa11.37□□□□□ -0.59
CCBE1-201ENST00000398179 C3P01024 1663 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 NKX2-1P43699 371 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-201ENST00000398179 PRDX4Q13162 271 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 HOXB13Q92826 284 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-201ENST00000398179 SMIM19Q96E16 107 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 PRR14Q9BWN1 585 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 MS4A6AQ9H2W1 248 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 NKX2-4Q9H2Z4 354 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 OARD1Q9Y530 152 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 A0A0J9YW62 118 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 PRKNO60260 465 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-201ENST00000398179 MMP9P14780 707 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 HIST3H2BBQ8N257 126 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 GBGT1Q8N5D6 347 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 TMEM229BQ8NBD8 167 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 NAT6Q93015 286 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 TMEM125Q96AQ2 219 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 TRAV9-2A0A087WT02 112 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 FAM106CPP0CH98 169 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 CEACAM8P31997 349 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-201ENST00000398179 HOXC5Q00444 222 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 FAM106AQ4KMX7 169 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 KIR2DS5A0A0G2JLQ3 304 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 A0A0G2JNG1 304 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 KIR2DS5Q14953 304 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 UNQ5815/PRO19632Q6UWF5 114 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 RTP4Q96DX8 246 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 REPIN1Q9BWE0 567 aaKnown RBP11.36□□□□□ -0.59
CCBE1-201ENST00000398179 FBXL12Q9NXK8 326 aa11.36□□□□□ -0.59
CCBE1-201ENST00000398179 C9JAW5 83 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 HCRTO43612 131 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 CDK5R1Q15078 307 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 ECSCRQ19T08 205 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 CEACAM21Q3KPI0 293 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 PPP1R27Q86WC6 154 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 C12orf76Q8N812 135 aaPredicted RBP11.35□□□□□ -0.59
CCBE1-201ENST00000398179 WBP2Q969T9 261 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 GPR82Q96P67 336 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 HIGD1AQ9Y241 93 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 PXDNQ92626 1479 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 PRSS54Q6PEW0 395 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 CTU1Q7Z7A3 348 aaKnown RBP11.35□□□□□ -0.59
CCBE1-201ENST00000398179 PTOV1Q86YD1 416 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 RAB40CQ96S21 281 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 CACNG5Q9UF02 275 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 SLIT3O75094 1523 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 M0R3E3 92 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 PAPLNO95428 1278 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 PEX11BO96011 259 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 SRD5A2P31213 254 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 NPC2P61916 151 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 EFNB1P98172 346 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 TNXAQ16473 311 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 GDF7Q7Z4P5 450 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 TMEM25Q86YD3 366 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 ZDHHC16Q969W1 377 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 CTHRC1Q96CG8 243 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 SCNM1Q9BWG6 230 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 NDUFB6O95139 128 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 LEPROTL1O95214 131 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 CXorf1O96002 111 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 OPRM1P35372 400 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 ELOCQ15369 112 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 CD200R1LQ6Q8B3 271 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 ZNF683Q8IZ20 524 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 BCORP1Q8N888 145 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 PERPQ96FX8 193 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 INSL6Q9Y581 213 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 HOXC4P09017 264 aaPredicted RBP11.35□□□□□ -0.59
CCBE1-201ENST00000398179 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 LIPHQ8WWY8 451 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 TM4SF19Q96DZ7 209 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 NUDT22Q9BRQ3 303 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 C1QTNF2Q9BXJ5 285 aa11.35□□□□□ -0.59
CCBE1-201ENST00000398179 COL3A1P02461 1466 aaPredicted RBP11.35□□□□□ -0.59
CCBE1-201ENST00000398179 IGSF23A1L1A6 192 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 SMIM9A6NGZ8 99 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 IQCF3P0C7M6 154 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 PRSS53Q2L4Q9 553 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 MS4A13Q5J8X5 152 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 WDR5BQ86VZ2 330 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 P2RX4Q99571 388 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 MEGF6O75095 1541 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 G3V2L1 256 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 F12P00748 615 aaPredicted RBP11.34□□□□□ -0.59
CCBE1-201ENST00000398179 HLA-DQA1P01909 254 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 HSPB1P04792 205 aaKnown RBP11.34□□□□□ -0.59
CCBE1-201ENST00000398179 CKS2P33552 79 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 ATP5J2P56134 94 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 DNM1P46Q6ZS02 220 aa11.34□□□□□ -0.59
CCBE1-201ENST00000398179 ZADH2Q8N4Q0 377 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms