RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 IL1AP01583 271 aa20.93■□□□□ 0.94
U2AF1-203ENST00000398137 BPIFB2Q8N4F0 458 aa20.93■□□□□ 0.94
U2AF1-203ENST00000398137 TEX29Q8N6K0 151 aa20.93■□□□□ 0.94
U2AF1-203ENST00000398137 SUMF2Q8NBJ7 301 aa20.93■□□□□ 0.94
U2AF1-203ENST00000398137 C8orf46Q8TAG6 207 aa20.93■□□□□ 0.94
U2AF1-203ENST00000398137 ZNF418Q8TF45 676 aaPredicted RBP20.93■□□□□ 0.94
U2AF1-203ENST00000398137 NICN1Q9BSH3 213 aa20.93■□□□□ 0.94
U2AF1-203ENST00000398137 ING3Q9NXR8 418 aa20.93■□□□□ 0.94
U2AF1-203ENST00000398137 FBLN5Q9UBX5 448 aa20.93■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A10PA6NDY2 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A18PA6NE21 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A16PA6NEW6 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A20PA6NIJ5 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A8PA6NJQ4 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A7PA6NKC0 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A22PA8MWA6 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A12PA8MX19 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A5PA8MXJ8 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A23PA8MXZ1 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A15PP0C7V4 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A13PP0C7W8 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A14PP0C7W9 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 FAM90A24PP0C7X0 464 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 PPIAL4GP0DN37 164 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 SNRPBP14678 240 aaKnown RBP20.92■□□□□ 0.94
U2AF1-203ENST00000398137 RPL31P62899 125 aaKnown RBP20.92■□□□□ 0.94
U2AF1-203ENST00000398137 KLF17Q5JT82 389 aaPredicted RBP20.92■□□□□ 0.94
U2AF1-203ENST00000398137 IDNKQ5T6J7 187 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 TPRX1Q8N7U7 411 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 LY6G5BQ8NDX9 201 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 NDNFQ8TB73 568 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 DPCDQ9BVM2 203 aaPredicted RBP20.92■□□□□ 0.94
U2AF1-203ENST00000398137 TM2D1Q9BX74 207 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 LPAR5Q9H1C0 372 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 TENM1Q9UKZ4 2725 aa20.92■□□□□ 0.94
U2AF1-203ENST00000398137 A0A0A6YYD4 124 aa20.91■□□□□ 0.94
U2AF1-203ENST00000398137 MEX3AA1L020 520 aaKnown RBP20.91■□□□□ 0.94
U2AF1-203ENST00000398137 SCGB2A2Q13296 93 aa20.91■□□□□ 0.94
U2AF1-203ENST00000398137 SIGIRRQ6IA17 410 aa20.91■□□□□ 0.94
U2AF1-203ENST00000398137 BRICD5Q6PL45 260 aa20.91■□□□□ 0.94
U2AF1-203ENST00000398137 LGALS14Q8TCE9 139 aa20.91■□□□□ 0.94
U2AF1-203ENST00000398137 C22orf15Q8WYQ4 148 aa20.91■□□□□ 0.94
U2AF1-203ENST00000398137 CYYR1Q96J86 154 aa20.91■□□□□ 0.94
U2AF1-203ENST00000398137 URM1Q9BTM9 101 aaKnown RBP20.91■□□□□ 0.94
U2AF1-203ENST00000398137 MRI1Q9BV20 369 aa20.91■□□□□ 0.94
U2AF1-203ENST00000398137 RCC2Q9P258 522 aaKnown RBP20.91■□□□□ 0.94
U2AF1-203ENST00000398137 ONECUT1Q9UBC0 465 aa20.91■□□□□ 0.94
U2AF1-203ENST00000398137 PAHP00439 452 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 LIPFP07098 398 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 EFNB2P52799 333 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 P2RX3P56373 397 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 AESQ08117 197 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 RAB12Q6IQ22 244 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 ZDHHC22Q8N966 263 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 NEK7Q8TDX7 302 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 COQ2Q96H96 371 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 SPACA1Q9HBV2 294 aa20.9■□□□□ 0.94
U2AF1-203ENST00000398137 NOL3O60936 208 aaKnown RBP20.89■□□□□ 0.93
U2AF1-203ENST00000398137 PDCD6O75340 191 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 CSN2P05814 226 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 PAX8Q06710 450 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 KRBOX4Q5JUW0 171 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 NKAPLQ5M9Q1 402 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 TMEM200BQ69YZ2 307 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 PLPPR1Q8TBJ4 325 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 RAB2BQ8WUD1 216 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 DCSTAMPQ9H295 470 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 RAB22AQ9UL26 194 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 PEX16Q9Y5Y5 336 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 AUP1Q9Y679 476 aa20.89■□□□□ 0.93
U2AF1-203ENST00000398137 FUT3P21217 361 aa20.88■□□□□ 0.93
U2AF1-203ENST00000398137 ERP29P30040 261 aaKnown RBP20.88■□□□□ 0.93
U2AF1-203ENST00000398137 GLIPR1P48060 266 aa20.88■□□□□ 0.93
U2AF1-203ENST00000398137 TMBIM6P55061 237 aa20.88■□□□□ 0.93
U2AF1-203ENST00000398137 ARF6P62330 175 aa20.88■□□□□ 0.93
U2AF1-203ENST00000398137 ZNF273Q14593 569 aa20.88■□□□□ 0.93
U2AF1-203ENST00000398137 TCF23Q7RTU1 214 aa20.88■□□□□ 0.93
U2AF1-203ENST00000398137 FAM216AQ8WUB2 273 aa20.88■□□□□ 0.93
U2AF1-203ENST00000398137 SLC25A46Q96AG3 418 aa20.88■□□□□ 0.93
U2AF1-203ENST00000398137 NEDD4LQ96PU5 975 aa20.88■□□□□ 0.93
U2AF1-203ENST00000398137 RAB6AP20340 208 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 CHATP28329 748 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 KCNJ3P48549 501 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 SPCS2Q15005 226 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 RTN4RL2Q86UN3 420 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 CROCCP3Q8IVE0 287 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 ISOC1Q96CN7 298 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 SUCNR1Q9BXA5 334 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 BARHL1Q9BZE3 327 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 KIF25Q9UIL4 384 aa20.87■□□□□ 0.93
U2AF1-203ENST00000398137 FUOMA2VDF0 154 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 MCRIP1C9JLW8 97 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 SOCS1O15524 211 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 CCL3L1P16619 93 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 BLVRBP30043 206 aaPredicted RBP20.86■□□□□ 0.93
U2AF1-203ENST00000398137 VEGFCP49767 419 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 METTL11BQ5VVY1 283 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 RSBN1Q5VWQ0 802 aaPredicted RBP20.86■□□□□ 0.93
U2AF1-203ENST00000398137 BCL6BQ8N143 479 aaPredicted RBP20.86■□□□□ 0.93
U2AF1-203ENST00000398137 FAM89BQ8N5H3 189 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms