RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 CALHM1Q8IU99 346 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 OR11H6Q8NGC7 330 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 ZNF671Q8TAW3 534 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 PP6455Q8WZ26 134 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 TMEM203Q969S6 136 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 NDUFB11Q9NX14 153 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 A6NIN4 97 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 OR5B21A6NL26 309 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 FAM90A22PA8MWA6 464 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 GATBO75879 557 aaKnown RBP12.88□□□□□ -0.35
CUX2-202ENST00000397643 DUS4LO95620 317 aaKnown RBP12.88□□□□□ -0.35
CUX2-202ENST00000397643 NRASP01111 189 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 MAPK3P27361 379 aaPredicted RBP12.88□□□□□ -0.35
CUX2-202ENST00000397643 PRDX2P32119 198 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 RPS11P62280 158 aaKnown RBP eCLIP12.88□□□□□ -0.35
CUX2-202ENST00000397643 RPS25P62851 125 aaKnown RBP12.88□□□□□ -0.35
CUX2-202ENST00000397643 SSX1Q16384 188 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 ACSM3Q53FZ2 586 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 ARSJQ5FYB0 599 aaPredicted RBP12.88□□□□□ -0.35
CUX2-202ENST00000397643 SERPINA12Q8IW75 414 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 LINC00482Q8N8I6 264 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 OR5D14Q8NGL3 314 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 OR13C5Q8NGS8 318 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 ADAT3Q96EY9 351 aaPredicted RBP12.88□□□□□ -0.35
CUX2-202ENST00000397643 TSSC4Q9Y5U2 329 aaPredicted RBP12.88□□□□□ -0.35
CUX2-202ENST00000397643 RYR2Q92736 4967 aa12.88□□□□□ -0.35
CUX2-202ENST00000397643 DNAH7Q8WXX0 4024 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 F2RL2O00254 374 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 TK1P04183 234 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 PGA5P0DJD9 388 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 TMEM42Q69YG0 159 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 MOB3CQ70IA8 216 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 TCF23Q7RTU1 214 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 CEACAM19Q7Z692 300 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 PARP16Q8N5Y8 322 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 OR5A2Q8NGI9 324 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 OR13D1Q8NGV5 346 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 TMEM106AQ96A25 262 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 OR14A2Q96R54 314 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 CHST5Q9GZS9 411 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 NEK6Q9HC98 313 aa12.87□□□□□ -0.35
CUX2-202ENST00000397643 TCRBV4S1A1TA0A5B7 111 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 MEX3AA1L020 520 aaKnown RBP12.86□□□□□ -0.35
CUX2-202ENST00000397643 RBP4P02753 201 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 OCMP0CE72 109 aaPredicted RBP12.86□□□□□ -0.35
CUX2-202ENST00000397643 CD36P16671 472 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 COL10A1Q03692 680 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 PLCXD3Q63HM9 321 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 C10orf99Q6UWK7 81 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 UNQ9370/PRO34162Q6UXP9 181 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 ETV3LQ6ZN32 361 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 PHYHIPQ92561 330 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 DERL3Q96Q80 235 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 NRIP2Q9BQI9 281 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 HES4Q9HCC6 221 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 GPR173Q9NS66 373 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 SLC7A11Q9UPY5 501 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 SACSQ9NZJ4 4579 aa12.86□□□□□ -0.35
CUX2-202ENST00000397643 TRBV5-7A0A0A0MS05 114 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 NOS1APO75052 506 aaPredicted RBP12.85□□□□□ -0.35
CUX2-202ENST00000397643 TFAP2AP05549 437 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 ZNF728P0DKX0 622 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 IGHV1-8P0DP01 117 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 GALP22466 123 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 AZGP1P25311 298 aaKnown RBP12.85□□□□□ -0.35
CUX2-202ENST00000397643 RPL5P46777 297 aaKnown RBP12.85□□□□□ -0.35
CUX2-202ENST00000397643 ALDH3B2P48448 385 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 PPP3R1P63098 170 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 FABP5Q01469 135 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 TIMM50Q3ZCQ8 353 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 STUB1Q9UNE7 303 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 HILPDAQ9Y5L2 63 aa12.85□□□□□ -0.35
CUX2-202ENST00000397643 TRDV1A0A1B0GX56 115 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 A0A1W2PPK0 400 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 J3QT63 122 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 K7N7A8 449 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 GABRPO00591 440 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 ZNF737O75373 536 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 SC5DO75845 299 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 ARL6IP5O75915 188 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 ATF1P18846 271 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 RAB3AP20336 220 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 PRKACBP22694 351 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 INSL4Q14641 139 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 UBE2V2Q15819 145 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 HSD17B12Q53GQ0 312 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 MINOS1Q5TGZ0 78 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 CD200R1LQ6Q8B3 271 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 TMEM91Q6ZNR0 172 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 GPR141Q7Z602 305 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 BATF2Q8N1L9 274 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 OR13F1Q8NGS4 319 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 OR13C9Q8NGT0 318 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 SPSB1Q96BD6 273 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 YIPF6Q96EC8 236 aa12.84□□□□□ -0.35
CUX2-202ENST00000397643 TAS2R4Q9NYW5 299 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms