RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 AHSA2Q719I0 299 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 OSR2Q8N2R0 312 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 MS4A15Q8N5U1 240 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 NANOGP1Q8N7R0 232 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 NKAIN3Q8N8D7 197 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 PGLYRP3Q96LB9 341 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 PPA2Q9H2U2 334 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 SPACA1Q9HBV2 294 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 SIRT4Q9Y6E7 314 aaPredicted RBP11.3□□□□□ -0.6
SEC13-204ENST00000397099 MEGF8Q7Z7M0 2845 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 M0QZ24 198 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 XPNPEP2O43895 674 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 HTR3BO95264 441 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 LALBAP00709 142 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 CALCBP10092 127 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 GTF2F2P13984 249 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 CELP19835 753 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 CDK2P24941 298 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 CD34P28906 385 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 GABRA5P31644 462 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 GLIPR1P48060 266 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 HSPA13P48723 471 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 PRRX1P54821 245 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 SRSF4Q08170 494 aaKnown RBP11.29□□□□□ -0.6
SEC13-204ENST00000397099 ABHD12Q8N2K0 398 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 TPRX1Q8N7U7 411 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 OR10A7Q8NGE5 316 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 OR2T6Q8NHC8 308 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 NDNFQ8TB73 568 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 RAB9BQ9NP90 201 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 ST3GAL6Q9Y274 331 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 TPRKBQ9Y3C4 175 aa11.29□□□□□ -0.6
SEC13-204ENST00000397099 A0A087X0M5 115 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 TRBV5-7A0A0A0MS05 114 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 A0A1B0GX30 115 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 LEUTXA8MZ59 168 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 OOSP1A8MZH6 123 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 TOR1AO14656 332 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 CDK1P06493 297 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 BRS3P32247 399 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 RBM11P57052 281 aaKnown RBP11.28□□□□□ -0.6
SEC13-204ENST00000397099 RPS11P62280 158 aaKnown RBP eCLIP11.28□□□□□ -0.6
SEC13-204ENST00000397099 GPR50Q13585 617 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 FAM189A2Q15884 450 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 SSX2Q16385 188 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 C6orf141Q5SZD1 244 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 SLC35E4Q6ICL7 350 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 C16orf82Q7Z2V1 217 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 RNF144BQ7Z419 303 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 LHFPL4Q7Z7J7 247 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 C17orf50Q8WW18 174 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 COQ2Q96H96 371 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 AKR1E2Q96JD6 320 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 NR1H4Q96RI1 486 aaPredicted RBP11.28□□□□□ -0.6
SEC13-204ENST00000397099 ZNF184Q99676 751 aaPredicted RBP11.28□□□□□ -0.6
SEC13-204ENST00000397099 UQCC2Q9BRT2 126 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 DPM3Q9P2X0 92 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 GHRLQ9UBU3 117 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 ING4Q9UNL4 249 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
SEC13-204ENST00000397099 MEIKINA0A087WXM9 373 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 TRAV24A0A0B4J272 114 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A10PA6NDY2 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A18PA6NE21 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A16PA6NEW6 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A20PA6NIJ5 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A7PA6NKC0 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A22PA8MWA6 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A12PA8MX19 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A5PA8MXJ8 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A23PA8MXZ1 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 H0YHG0 523 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 F2RL2O00254 374 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 OR7C1O76099 320 aaPredicted RBP11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A15PP0C7V4 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A13PP0C7W8 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A14PP0C7W9 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 FAM90A24PP0C7X0 464 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 GZMHP20718 246 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 RANBP1P43487 201 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 OR3A4PP47883 348 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 ATXN7L3Q14CW9 347 aaPredicted RBP11.27□□□□□ -0.61
SEC13-204ENST00000397099 LAIR2Q6ISS4 152 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 PIFOQ8TCI5 191 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 DERL3Q96Q80 235 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 OR14A2Q96R54 314 aa11.27□□□□□ -0.61
SEC13-204ENST00000397099 NKX1-2Q9UD57 310 aaPredicted RBP11.27□□□□□ -0.61
SEC13-204ENST00000397099 AMMECR1Q9Y4X0 333 aaPredicted RBP11.27□□□□□ -0.61
SEC13-204ENST00000397099 PTGES3LE9PB15 166 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 KCNAB3O43448 404 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 CDRT1O95170 752 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 IGLV1-47P01700 117 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 GLAP06280 429 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 RBM39Q14498 530 aaKnown RBP11.26□□□□□ -0.61
SEC13-204ENST00000397099 SPHARQ15513 63 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 TRAM1Q15629 374 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms