RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 Q8WTZ3 238 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 PRDM14Q9GZV8 571 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 KHDC3LQ587J8 217 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 RXFP4Q8TDU9 374 aa13.71□□□□□ -0.21
GNE-202ENST00000396594 FLYWCH2Q96CP2 140 aaKnown RBP13.71□□□□□ -0.21
GNE-202ENST00000396594 RBM38Q9H0Z9 239 aaKnown RBP13.71□□□□□ -0.21
GNE-202ENST00000396594 DEDDO75618 318 aa13.71□□□□□ -0.22
GNE-202ENST00000396594 HPRT1P00492 218 aa13.71□□□□□ -0.22
GNE-202ENST00000396594 RBP4P02753 201 aa13.71□□□□□ -0.22
GNE-202ENST00000396594 COL9A2Q14055 689 aaPredicted RBP13.71□□□□□ -0.22
GNE-202ENST00000396594 ZNF273Q14593 569 aa13.71□□□□□ -0.22
GNE-202ENST00000396594 HLXQ14774 488 aaPredicted RBP13.71□□□□□ -0.22
GNE-202ENST00000396594 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.22
GNE-202ENST00000396594 C6orf201Q7Z4U5 140 aa13.71□□□□□ -0.22
GNE-202ENST00000396594 NPAS1Q99742 590 aa13.71□□□□□ -0.22
GNE-202ENST00000396594 HSF4Q9ULV5 492 aa13.71□□□□□ -0.22
GNE-202ENST00000396594 SMCHD1A6NHR9 2005 aa13.71□□□□□ -0.22
GNE-202ENST00000396594 LIMS1P48059 325 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 GUCA2AQ02747 115 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 FA2HQ7L5A8 372 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 GPR27Q9NS67 375 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 FFAR1O14842 300 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 ICMTO60725 284 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 PPYP01298 95 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 FGF12P61328 243 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 PAFAH1B2P68402 229 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 IL22RA2Q969J5 263 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 TMPRSS13Q9BYE2 586 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 ANKRD12Q6UB98 2062 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 A0A1W2PR77 199 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 WNT1P04628 370 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 GNG4P50150 75 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 SULT1A1P50225 295 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 RAB9AP51151 201 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 RBM11P57052 281 aaKnown RBP13.7□□□□□ -0.22
GNE-202ENST00000396594 VASH2Q86V25 355 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 ZNF429Q86V71 674 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 SFTPA2Q8IWL1 248 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 SFTPA1Q8IWL2 248 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 SNX22Q96L94 193 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 RALGAPA2Q2PPJ7 1873 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 TRBV5-5A0A0J9YX44 114 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 NXPH3O95157 252 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 OPN1MWP04001 364 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 OPN1MW2P0DN77 364 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 OPN1MW3P0DN78 364 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 TMEM123Q8N131 208 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 SIRT7Q9NRC8 400 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 LYRM2Q9NU23 88 aaPredicted RBP13.7□□□□□ -0.22
GNE-202ENST00000396594 SELENOPP49908 381 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 SELENOTP62341 195 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 ZG16BQ96DA0 208 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 ZDHHC11Q9H8X9 412 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 NAT8Q9UHE5 227 aa13.7□□□□□ -0.22
GNE-202ENST00000396594 RAB29O14966 203 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 MYPOPQ86VE0 399 aaPredicted RBP13.69□□□□□ -0.22
GNE-202ENST00000396594 ABHD3Q8WU67 409 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 WSB1Q9Y6I7 421 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 TTC3P53804 2025 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 ERVFC1-1P60608 527 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 NAAAQ02083 359 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 AANATQ16613 207 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 PDPNQ86YL7 162 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 LRFN3Q9BTN0 628 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 GOLT1BQ9Y3E0 138 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 WIPI2Q9Y4P8 454 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 SLC25A5P05141 298 aaKnown RBP13.69□□□□□ -0.22
GNE-202ENST00000396594 MMP7P09237 267 aaPredicted RBP13.69□□□□□ -0.22
GNE-202ENST00000396594 TBC1D26Q86UD7 250 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 OR5C1Q8NGR4 320 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 SEC11CQ9BY50 192 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 NXF2Q9GZY0 626 aaKnown RBP13.69□□□□□ -0.22
GNE-202ENST00000396594 MAGT1Q9H0U3 335 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 CLN8Q9UBY8 286 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 ST6GALNAC2Q9UJ37 374 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 A0A1B0GVG6 124 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 GATCO43716 136 aaKnown RBP13.69□□□□□ -0.22
GNE-202ENST00000396594 OR5AC1P0C628 307 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 RPEL1Q2QD12 228 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 MISP3Q96FF7 219 aa13.69□□□□□ -0.22
GNE-202ENST00000396594 IGSF23A1L1A6 192 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 GPR6P46095 362 aaPredicted RBP13.68□□□□□ -0.22
GNE-202ENST00000396594 CD81P60033 236 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 ZNF658BQ4V348 819 aaPredicted RBP13.68□□□□□ -0.22
GNE-202ENST00000396594 MRGPRDQ8TDS7 321 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 SYNGR1O43759 233 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 SEC11BP0C7V7 166 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 HOXB3P14651 431 aaPredicted RBP13.68□□□□□ -0.22
GNE-202ENST00000396594 C1orf100Q5SVJ3 147 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 C10orf128Q5T292 105 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 FAM27D1Q5T7N8 215 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 FNDC7Q5VTL7 733 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 SLC22A18ASQ8N1D0 253 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 PI3P19957 117 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 FABP9Q0Z7S8 132 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 IZUMO4Q1ZYL8 232 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 SEZ6L2Q6UXD5 910 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 OR10G4Q8NGN3 311 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 OR10G9Q8NGN4 311 aa13.68□□□□□ -0.22
GNE-202ENST00000396594 OR10G7Q8NGN6 311 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms