RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 HIST1H1TP22492 207 aaPredicted RBP3.79□□□□□ -1.8
GABPB1-204ENST00000396464 S100GP29377 79 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 AGTR1P30556 359 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 NCBP2P52298 156 aaKnown RBP eCLIP3.79□□□□□ -1.83e-6■■■■□ 22.2
GABPB1-204ENST00000396464 ZNF138P52744 262 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 TAS2R46P59540 309 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 HIST1H3AP68431 136 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 H3F3AP84243 136 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 REG3AQ06141 175 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 PMVKQ15126 192 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF684Q5T5D7 378 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 FAM162BQ5T6X4 162 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 TSPO2Q5TGU0 170 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 SPATA31B1PQ5VZV4 182 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 TMEM236Q5W0B7 351 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 Q6ZTC4 211 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 HIST2H3AQ71DI3 136 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF561Q8N587 486 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 C11orf40Q8WZ69 217 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 CCL17Q92583 94 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 NEUROG1Q92886 237 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 GALNT14Q96FL9 552 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 SPACA5Q96QH8 159 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 PLEKHF1Q96S99 279 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 ALX4Q9H161 411 aaPredicted RBP3.79□□□□□ -1.8
GABPB1-204ENST00000396464 ZBP1Q9H171 429 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 ZSCAN16Q9H4T2 348 aaPredicted RBP3.79□□□□□ -1.8
GABPB1-204ENST00000396464 DDX31Q9H8H2 851 aaKnown RBP3.79□□□□□ -1.8
GABPB1-204ENST00000396464 IDI2-AS1Q9NZ38 188 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 TRMT112Q9UI30 125 aaKnown RBP3.79□□□□□ -1.8
GABPB1-204ENST00000396464 PYGO1Q9Y3Y4 419 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 RNF17Q9BXT8 1623 aaKnown RBP3.79□□□□□ -1.8
GABPB1-204ENST00000396464 TET3O43151 1660 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 NCOA1Q15788 1441 aa3.79□□□□□ -1.8
GABPB1-204ENST00000396464 PRDM15P57071 1507 aaPredicted RBP3.79□□□□□ -1.8
GABPB1-204ENST00000396464 IGHV7-81A0A0B4J1V7 117 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 A0A0J9YXV3 536 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 A0A0U1RQV1 116 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 EXOC1LA0A1B0GW35 172 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 TMEM150BA6NC51 233 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 KPNA4O00629 521 aaPredicted RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 SLC31A2O15432 143 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF780AO75290 641 aaPredicted RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 PDCD6O75340 191 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 RAB3BP20337 219 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 TCTAP57738 103 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 C1QTNF8P60827 252 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 AP1S1P61966 158 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 EMX1Q04741 257 aaPredicted RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 IHHQ14623 411 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 RGNQ15493 299 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 DEFB115Q30KQ5 88 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 C9orf66Q5T8R8 295 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 STPG1Q5TH74 334 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 RSBN1Q5VWQ0 802 aaPredicted RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 FAM220AQ7Z4H9 259 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 STX19Q8N4C7 294 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 EIF4E3Q8N5X7 224 aaKnown RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 MCFD2Q8NI22 146 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 VN1R17PQ8TDU5 208 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 DCUN1D1Q96GG9 259 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 SMARCD1Q96GM5 515 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 GMPPAQ96IJ6 420 aaPredicted RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 SIGLEC12Q96PQ1 595 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 C1QTNF4Q9BXJ3 329 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 ABCG5Q9H222 651 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 POMKQ9H5K3 350 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 HEBP1Q9NRV9 189 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 GSKIPQ9P0R6 139 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 OR52A1Q9UKL2 312 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 ANGPT4Q9Y264 503 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 DEPDC5O75140 1603 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 MADDQ8WXG6 1647 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 BCORL1Q5H9F3 1711 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 PTPRKQ15262 1439 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 A0A087WWV3 80 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 SMIM26A0A096LP01 95 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 TEX50A0A1B0GTY4 177 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 H3BP45 60 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 MYL12BO14950 172 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 EDIL3O43854 480 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 GALR3O60755 368 aaPredicted RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 ATG12O94817 140 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 YIF1AO95070 293 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 SERPINA7P05543 415 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 OR13C7P0DN81 318 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 ADRB3P13945 408 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 OR3A4PP47883 348 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 GTF2BQ00403 316 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 RUNX1Q01196 453 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 C1DQ13901 141 aaKnown RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 HERPUD1Q15011 391 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 GSG1Q2KHT4 349 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 OR2B11Q5JQS5 317 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 FBXW9Q5XUX1 488 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 ELP2Q6IA86 826 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 C19orf48Q6RUI8 117 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms