RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ZNF260Q3ZCT1 412 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 SSX6Q7RTT6 188 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 OVCH2Q7RTZ1 564 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 CATSPERDQ86XM0 798 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 TCEANCQ8N8B7 351 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 PPIL3Q9H2H8 161 aaKnown RBP12.38□□□□□ -0.43
SNCA-205ENST00000394991 RIBC2Q9H4K1 309 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 HMG20AQ9NP66 347 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 EXOSC4Q9NPD3 245 aaKnown RBP12.38□□□□□ -0.43
SNCA-205ENST00000394991 ING3Q9NXR8 418 aa12.38□□□□□ -0.43
SNCA-205ENST00000394991 IGKV1-9A0A0C4DH69 117 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 IGKV1-12A0A0C4DH73 117 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 FUOMA2VDF0 154 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 ZNF729A6NN14 1252 aaPredicted RBP12.37□□□□□ -0.43
SNCA-205ENST00000394991 ZAR1LA6NP61 321 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 H3BNX3 289 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 IGKV1D-12P01611 117 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 GPR12P47775 334 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 CXorf66Q5JRM2 361 aaPredicted RBP12.37□□□□□ -0.43
SNCA-205ENST00000394991 KRBOX4Q5JUW0 171 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 ZFP1Q6P2D0 407 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 C10orf67Q8IYJ2 551 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 RNF152Q8N8N0 203 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 DNAAF1Q8NEP3 725 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 IL4I1Q96RQ9 567 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 KRTAP17-1Q9BYP8 105 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 COMMD4Q9H0A8 199 aa12.37□□□□□ -0.43
SNCA-205ENST00000394991 AMMECR1Q9Y4X0 333 aaPredicted RBP12.37□□□□□ -0.43
SNCA-205ENST00000394991 ZNF670-ZNF695F2Z2N8 137 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 J3QR06 171 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 AP4M1O00189 453 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 SH2D1BO14796 132 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 CSN2P05814 226 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 CGB3P0DN86 165 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 CGB7P0DN87 165 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 POLR2IP36954 125 aaKnown RBP12.36□□□□□ -0.43
SNCA-205ENST00000394991 RBP2P50120 134 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 ATP1B3P54709 279 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 FOXE3Q13461 319 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 GPR50Q13585 617 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 ATXN7L3Q14CW9 347 aaPredicted RBP12.36□□□□□ -0.43
SNCA-205ENST00000394991 C12orf73Q69YU5 71 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 Q6P435 159 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 MEPCEQ7L2J0 689 aaKnown RBP12.36□□□□□ -0.43
SNCA-205ENST00000394991 TMEM163Q8TC26 289 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 RFT1Q96AA3 541 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 CITED4Q96RK1 184 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 MNTQ99583 582 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 OSBPL10Q9BXB5 764 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 CLN6Q9NWW5 311 aa12.36□□□□□ -0.43
SNCA-205ENST00000394991 KBTBD11-OT1A0A1B0GTJ5 212 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 SLC33A1O00400 549 aaPredicted RBP12.35□□□□□ -0.43
SNCA-205ENST00000394991 CCRL2O00421 344 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 CYB5AP00167 134 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 ZNF44P15621 663 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 MTCP1P56278 107 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 CFHR3Q02985 330 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 PDZK1IP1Q13113 114 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 MADCAM1Q13477 382 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 ASPHD1Q5U4P2 390 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 OR8H3Q8N146 312 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 YIPF7Q8N8F6 280 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 C4orf3Q8WVX3 66 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 ADAT3Q96EY9 351 aaPredicted RBP12.35□□□□□ -0.43
SNCA-205ENST00000394991 HRASLS5Q96KN8 279 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 PSG11Q9UQ72 335 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 ORC6Q9Y5N6 252 aa12.35□□□□□ -0.43
SNCA-205ENST00000394991 LOC107986453A0A1B0GWG9 222 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 SERPINA3P01011 423 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 ELANEP08246 267 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 FRMD6-AS1P0C7T7 363 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 GLP1RP43220 463 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 RAB7AP51149 207 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 SCN1BQ07699 218 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 EBI3Q14213 229 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 AADACL4Q5VUY2 407 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 NXNL2Q5VZ03 156 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 ADAMTSL5Q6ZMM2 481 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 TGIF2LXQ8IUE1 241 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 PRSS35Q8N3Z0 413 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 Q8N6K4 173 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 Q8N9W7 124 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 OR13A1Q8NGR1 328 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
SNCA-205ENST00000394991 TBX5Q99593 518 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 GABARAPL3Q9BY60 117 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 ABCG5Q9H222 651 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 LIN7CQ9NUP9 197 aaKnown RBP12.34□□□□□ -0.43
SNCA-205ENST00000394991 CALYQ9NYX4 217 aa12.34□□□□□ -0.43
SNCA-205ENST00000394991 SIRT4Q9Y6E7 314 aaPredicted RBP12.34□□□□□ -0.43
SNCA-205ENST00000394991 IGHV3-72A0A0B4J1Y9 119 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 EI24O14681 340 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 KDM4BO94953 1096 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 KRT8P05787 483 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 HCKP08631 526 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 ATF1P18846 271 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 KIR3DL2P43630 455 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 GNG10P50151 68 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 EFNB1P98172 346 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 LTC4SQ16873 150 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms