RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 RAC2P15153 192 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 CEACAM6P40199 344 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 CCL8P80075 99 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 QRFPP83859 136 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 HPSE2Q8WWQ2 592 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 SDHAF2Q9NX18 166 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 FAM90A27PA6NNH2 459 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 PVALBP20472 110 aaPredicted RBP13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 CHATP28329 748 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 SHEQ5VZ18 495 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 C1orf147Q96MC9 270 aaPredicted RBP13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 REPIN1Q9BWE0 567 aaKnown RBP13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 EIF5A2Q9GZV4 153 aaKnown RBP13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 TP53TG5Q9Y2B4 290 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 YLPM1P49750 1951 aaKnown RBP13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 SH2D1BO14796 132 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 ATXN7O15265 892 aaPredicted RBP13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 ZZEF1O43149 2961 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 PSG7Q13046 419 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 ESCO2Q56NI9 601 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 LRRC29Q8WV35 223 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 SPRY4Q9C004 299 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 ATP23Q9Y6H3 246 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 ADGRG4Q8IZF6 3080 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 CENPEQ02224 2701 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 A0A0D9SG52 128 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 ATP6V1G2-DDX39BF2Z307 99 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 CRHP06850 196 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 POLR2GP62487 172 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 RTL6Q6ICC9 239 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 OR2A2Q6IF42 318 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 OVCH2Q7RTZ1 564 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 MS4A7Q9GZW8 240 aaPredicted RBP13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 KIF25Q9UIL4 384 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 PRR33A8MZF0 331 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 PROB1E7EW31 1015 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 RGS13O14921 159 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 GFRA3O60609 400 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 CEACAM1P13688 526 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 TPT1P13693 172 aaKnown RBP13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 NDUFB7P17568 137 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 TBPP20226 339 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 BHLHA15Q7RTS1 189 aaPredicted RBP13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 LGI3Q8N145 548 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 SCCPDHQ8NBX0 429 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 RBMXL1Q96E39 390 aaKnown RBP13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 DCTN5Q9BTE1 182 aa13.61□□□□□ -0.23
SMARCD1-202ENST00000394963 MSGN1A6NI15 193 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 CD74P04233 296 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 NAT2P11245 290 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 RPL12P30050 165 aaKnown RBP13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 ZNF154Q13106 437 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 LY6G6FQ5SQ64 297 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 RPL7L1Q6DKI1 246 aaKnown RBP13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 S100PBPQ96BU1 408 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 C2orf50Q96LR7 162 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 POLDIP2Q9Y2S7 368 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 ZFHX4Q86UP3 3567 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 CECR9P0C854 216 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 H1FXQ92522 213 aaKnown RBP13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 ARL11Q969Q4 196 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 TSNAXQ99598 290 aaKnown RBP13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 OR1A1Q9P1Q5 309 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 NUP50Q9UKX7 468 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 SMCO3A2RU48 225 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 ZNF724A8MTY0 619 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 OTX1P32242 354 aaPredicted RBP13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 OR8G2PQ6IF36 304 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 TBC1D26Q86UD7 250 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 MOGAT3Q86VF5 341 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 OR5A2Q8NGI9 324 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 BCL2L2Q92843 193 aaPredicted RBP13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 RBPMSQ93062 196 aaKnown RBP13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 C1QTNF5Q9BXJ0 243 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 PRDM14Q9GZV8 571 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 FN3KRPQ9HA64 309 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 TAF9BQ9HBM6 251 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 DYNLRB1Q9NP97 96 aa13.6□□□□□ -0.23
SMARCD1-202ENST00000394963 NCKAP5O14513 1909 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 CSPG4Q6UVK1 2322 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 KIR2DS1A0A191URI9 304 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 ADAM20O43506 726 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 KIR2DS4P43632 304 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 KIR2DS1Q14954 304 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 ADAM5Q6NVV9 412 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 PXT1Q8NFP0 134 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 SCARB1Q8WTV0 552 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 LEAP2Q969E1 77 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 CREBBPQ92793 2442 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 CSRP1P21291 193 aaKnown RBP13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 CCL1P22362 96 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 CAMLGP49069 296 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 FAM53AQ6NSI3 398 aaPredicted RBP13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 CCDC54Q8NEL0 328 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 NARFLQ9H6Q4 476 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 FAM24AA6NFZ4 105 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 LRP11Q86VZ4 500 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 GLYATL2Q8WU03 294 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 CCL17Q92583 94 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms