RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CCL24O00175 119 aa16.64■□□□□ 0.25
TRAF4-203ENST00000394925 DEGS1O15121 323 aa16.64■□□□□ 0.25
TRAF4-203ENST00000394925 FGF16O43320 207 aa16.64■□□□□ 0.25
TRAF4-203ENST00000394925 GLP1RP43220 463 aa16.64■□□□□ 0.25
TRAF4-203ENST00000394925 LUMP51884 338 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-203ENST00000394925 DIAPH2-AS1Q14236 149 aa16.64■□□□□ 0.25
TRAF4-203ENST00000394925 CHST4Q8NCG5 386 aa16.64■□□□□ 0.25
TRAF4-203ENST00000394925 UTP4Q969X6 686 aaKnown RBP16.64■□□□□ 0.25
TRAF4-203ENST00000394925 RNF166Q96A37 237 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-203ENST00000394925 HRASLS5Q96KN8 279 aa16.64■□□□□ 0.25
TRAF4-203ENST00000394925 ASCL2Q99929 193 aa16.64■□□□□ 0.25
TRAF4-203ENST00000394925 LINC01548A6NM66 108 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 HSPB6O14558 160 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 IGHG2P01859 326 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 GP2P55259 537 aaKnown RBP16.63■□□□□ 0.25
TRAF4-203ENST00000394925 ISL1P61371 349 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 ZNF85Q03923 595 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 MADCAM1Q13477 382 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 FOXRED2Q8IWF2 684 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 STPG2Q8N412 459 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 OR2G2Q8NGZ5 317 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 CALYQ9NYX4 217 aa16.63■□□□□ 0.25
TRAF4-203ENST00000394925 C3orf84H3BNL1 204 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 IGKV1D-33P01593 117 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 IGKV1-33P01594 117 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 CGB3P0DN86 165 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 CGB7P0DN87 165 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 LTC4SQ16873 150 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 DEFB136Q30KP8 78 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 ZNF565Q8N9K5 539 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 OR13C9Q8NGT0 318 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 MBOAT4Q96T53 435 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 IDI2-AS1Q9NZ38 188 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 FRRS1LQ9P0K9 344 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 KIF25Q9UIL4 384 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 PSG11Q9UQ72 335 aa16.62■□□□□ 0.25
TRAF4-203ENST00000394925 G3V2T6 193 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 RPLP1P05386 114 aaKnown RBP16.61■□□□□ 0.25
TRAF4-203ENST00000394925 GNG10P50151 68 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 RAB7AP51149 207 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 CDK5R1Q15078 307 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 KDM4DQ6B0I6 523 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 TEX38Q6PEX7 206 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 SAXO1Q8IYX7 474 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 OR8H3Q8N146 312 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 CCDC197Q8NCU1 140 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 OR51T1Q8NGJ9 327 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 OR13A1Q8NGR1 328 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 OR10AC1Q8NH08 325 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 DCLRE1BQ9H816 532 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 RHOFQ9HBH0 211 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 POMPQ9Y244 141 aa16.61■□□□□ 0.25
TRAF4-203ENST00000394925 MEIKINA0A087WXM9 373 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 H0YJX3 145 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 ZFPL1O95159 310 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 MT-ND2P03891 347 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 ISG15P05161 165 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 ECI1P42126 302 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 C9orf66Q5T8R8 295 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 LCNL1Q6ZST4 164 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 OR51A4Q8NGJ6 313 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 OR5M8Q8NGP6 311 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 OR13C3Q8NGS6 347 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 RFESDQ8TAC1 157 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 HAVCR2Q8TDQ0 301 aa16.6■□□□□ 0.25
TRAF4-203ENST00000394925 NR1H4Q96RI1 486 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-203ENST00000394925 DYNC2H1Q8NCM8 4307 aaKnown RBP16.59■□□□□ 0.25
TRAF4-203ENST00000394925 DNAH7Q8WXX0 4024 aa16.59■□□□□ 0.25
TRAF4-203ENST00000394925 GYG2O15488 501 aa16.59■□□□□ 0.25
TRAF4-203ENST00000394925 IL1AP01583 271 aa16.59■□□□□ 0.25
TRAF4-203ENST00000394925 TMEM225BP0DP42 221 aa16.59■□□□□ 0.25
TRAF4-203ENST00000394925 C21orf33P30042 268 aaPredicted RBP16.59■□□□□ 0.25
TRAF4-203ENST00000394925 POLR2IP36954 125 aaKnown RBP16.59■□□□□ 0.25
TRAF4-203ENST00000394925 NANOS3P60323 173 aaKnown RBP16.59■□□□□ 0.25
TRAF4-203ENST00000394925 PNLIPRP3Q17RR3 467 aa16.59■□□□□ 0.25
TRAF4-203ENST00000394925 PAN3Q58A45 887 aaKnown RBP16.59■□□□□ 0.25
TRAF4-203ENST00000394925 EME1Q96AY2 570 aa16.59■□□□□ 0.25
TRAF4-203ENST00000394925 OSBPL10Q9BXB5 764 aa16.59■□□□□ 0.25
TRAF4-203ENST00000394925 TENM2Q9NT68 2774 aa16.58■□□□□ 0.25
TRAF4-203ENST00000394925 A0A1W2PPE3 182 aa16.58■□□□□ 0.24
TRAF4-203ENST00000394925 NCBP2LA6PVI3 153 aaKnown RBP16.58■□□□□ 0.24
TRAF4-203ENST00000394925 AP4M1O00189 453 aa16.58■□□□□ 0.24
TRAF4-203ENST00000394925 KLHL22Q53GT1 634 aa16.58■□□□□ 0.24
TRAF4-203ENST00000394925 MOB3BQ86TA1 216 aa16.58■□□□□ 0.24
TRAF4-203ENST00000394925 OR10X1Q8NGY0 326 aa16.58■□□□□ 0.24
TRAF4-203ENST00000394925 OR8U1Q8NH10 309 aa16.58■□□□□ 0.24
TRAF4-203ENST00000394925 MRGPRDQ8TDS7 321 aa16.58■□□□□ 0.24
TRAF4-203ENST00000394925 ENOPH1Q9UHY7 261 aa16.58■□□□□ 0.24
TRAF4-203ENST00000394925 MYRFQ9Y2G1 1151 aa16.58■□□□□ 0.24
TRAF4-203ENST00000394925 IGHV3-72A0A0B4J1Y9 119 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 SEC14L6B5MCN3 397 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 HCKP08631 526 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 HTR1AP08908 422 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 GPR12P47775 334 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 TMED1Q13445 227 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 KIR2DS1Q14954 304 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 ATP6AP1Q15904 470 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 DNAL1Q4LDG9 190 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 CXorf66Q5JRM2 361 aaPredicted RBP16.57■□□□□ 0.24
TRAF4-203ENST00000394925 FDX2Q6P4F2 183 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms