RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LIAT1Q6ZQX7 453 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 DTX3Q8N9I9 347 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 FBLIM1Q8WUP2 373 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 TNFAIP8L1Q8WVP5 186 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 TSEN15Q8WW01 171 aaKnown RBP7.08□□□□□ -1.28
ATG4A-205ENST00000394892 LEAP2Q969E1 77 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 FOXRED1Q96CU9 486 aaPredicted RBP7.08□□□□□ -1.28
ATG4A-205ENST00000394892 KIRREL1Q96J84 757 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 RDH12Q96NR8 316 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 NR1H4Q96RI1 486 aaPredicted RBP7.08□□□□□ -1.28
ATG4A-205ENST00000394892 NPFFR1Q9GZQ6 430 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 NEK6Q9HC98 313 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 BABAM2Q9NXR7 383 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 TAS2R3Q9NYW6 316 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 DPM3Q9P2X0 92 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 KIF25Q9UIL4 384 aa7.08□□□□□ -1.28
ATG4A-205ENST00000394892 DIMT1Q9UNQ2 313 aaKnown RBP7.08□□□□□ -1.28
ATG4A-205ENST00000394892 TRGV10A0A0A0MS01 117 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 TRBV5-7A0A0A0MS05 114 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 KBTBD11-OT1A0A1B0GTJ5 212 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 NPIPB11E5RHQ5 1161 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 G3V4G9 280 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 GPX5O75715 221 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 IGHV3-7P01780 117 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 ALDOBP05062 364 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 RAB3AP20336 220 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 C21orf33P30042 268 aaPredicted RBP7.07□□□□□ -1.28
ATG4A-205ENST00000394892 PTGFRP43088 359 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 MTNR1BP49286 362 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 GP2P55259 537 aaKnown RBP7.07□□□□□ -1.28
ATG4A-205ENST00000394892 SLC34A1Q06495 639 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 MRPL28Q13084 256 aaKnown RBP7.07□□□□□ -1.28
ATG4A-205ENST00000394892 RCN1Q15293 331 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 HLA-DRB5Q30154 266 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 BEAN1Q3B7T3 259 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 CCDC58Q4VC31 144 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 OGFRL1Q5TC84 451 aaPredicted RBP7.07□□□□□ -1.28
ATG4A-205ENST00000394892 TRAPPC6BQ86SZ2 158 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 SATL1Q86VE3 508 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 C10orf67Q8IYJ2 551 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 CHST4Q8NCG5 386 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 OR2T6Q8NHC8 308 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 RFESDQ8TAC1 157 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 NDNFQ8TB73 568 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 MRAPQ8TCY5 172 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 GPR148Q8TDV2 347 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 CYGBQ8WWM9 190 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 SGCDQ92629 289 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 GHSRQ92847 366 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 TMEM106AQ96A25 262 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 OR5M11Q96RB7 305 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 CITED2Q99967 270 aaPredicted RBP7.07□□□□□ -1.28
ATG4A-205ENST00000394892 RHOFQ9HBH0 211 aa7.07□□□□□ -1.28
ATG4A-205ENST00000394892 A0A1W2PPK0 400 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A18PA6NE21 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A16PA6NEW6 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A20PA6NIJ5 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A9PA6NNJ1 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A12PA8MX19 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A5PA8MXJ8 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 C15orf65H3BRN8 121 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 BUB1B-PAK6H3BSN5 160 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 GEMIN2O14893 280 aaKnown RBP7.06□□□□□ -1.28
ATG4A-205ENST00000394892 CASQ2O14958 399 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-205ENST00000394892 RPSAP08865 295 aaKnown RBP7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A15PP0C7V4 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A13PP0C7W8 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A14PP0C7W9 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FAM90A24PP0C7X0 464 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 HTR1DP28221 377 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 SSTR5P35346 364 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 LOXL3P58215 753 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 PAX5Q02548 391 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 ST3GAL4Q11206 333 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 IL13RA2Q14627 380 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 INSL4Q14641 139 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 PAN3Q58A45 887 aaKnown RBP7.06□□□□□ -1.28
ATG4A-205ENST00000394892 TPTE2P1Q5T6R2 138 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 KPRPQ5T749 579 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-205ENST00000394892 SAMD5Q5TGI4 173 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 Q6ZPA2 131 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 C5orf24Q7Z6I8 188 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 SUMF2Q8NBJ7 301 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 ZNF555Q8NEP9 628 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 OR52N1Q8NH53 320 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 UBALD1Q8TB05 177 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 SMIM19Q96E16 107 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 MRPL48Q96GC5 212 aaKnown RBP7.06□□□□□ -1.28
ATG4A-205ENST00000394892 TMEM80Q96HE8 168 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 MMP28Q9H239 520 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 NCOR1P1Q9H4R4 102 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 RAB18Q9NP72 206 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 FKBP14Q9NWM8 211 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 CALYQ9NYX4 217 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 IL36GQ9NZH8 169 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 NKX1-2Q9UD57 310 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-205ENST00000394892 GLS2Q9UI32 602 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 PSORS1C1Q9UIG5 152 aa7.06□□□□□ -1.28
ATG4A-205ENST00000394892 EXOSC1Q9Y3B2 195 aaKnown RBP7.06□□□□□ -1.28
ATG4A-205ENST00000394892 MEIKINA0A087WXM9 373 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms