RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ARHGEF17Q96PE2 2063 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 ADGRL3Q9HAR2 1447 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 KIF1BO60333 1816 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 SMIM9A6NGZ8 99 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 K7EPK0 472 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 FGF17O60258 216 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 SCO1O75880 301 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 LYPD3O95274 346 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 MELTFP08582 738 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 CYB561P49447 251 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 PGFP49763 221 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 TAS2R19P59542 299 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 TOMM34Q15785 309 aaPredicted RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 TIMM23BQ5SRD1 257 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 ZNF550Q7Z398 422 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 FAM71E2Q8N5Q1 922 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 AQP11Q8NBQ7 271 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 OR8S1Q8NH09 359 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 TMBIM1Q969X1 311 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 FMC1Q96HJ9 113 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 RSPO3Q9BXY4 272 aaPredicted RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 SLC25A39Q9BZJ4 359 aaPredicted RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 CDC42EP4Q9H3Q1 356 aaKnown RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 CARMIL3Q8ND23 1372 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 NID2Q14112 1375 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 LINC00862A6NCI5 91 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 NCBP2LA6PVI3 153 aaKnown RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 ACOT8O14734 319 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 PDCD5O14737 125 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 MFSD11O43934 449 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 UPK1BO75841 260 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 SNRPCP09234 159 aaKnown RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 ZSCAN5DPP0CG00 497 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 GKN3PP0CG01 181 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 OR5H8P0DN80 308 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 IGHV4-38-2P0DP08 117 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 GTF2F2P13984 249 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 ERVK11-1P61568 191 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 LSM3P62310 102 aaKnown RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 FKBP3Q00688 224 aaKnown RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 ARPINQ7Z6K5 226 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 SLC37A2Q8TED4 501 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 MALSU1Q96EH3 234 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 KLF6Q99612 283 aaPredicted RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 HCAR1Q9BXC0 346 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 HHLA2Q9UM44 414 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 CLDN25C9JDP6 229 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 J3QT63 122 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 M0R129 80 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 FGF1P05230 155 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 REG1AP05451 166 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 ELK1P19419 428 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 CASP1P29466 404 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 NDUFA8P51970 172 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 GNA12Q03113 381 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 ANKRD22Q5VYY1 191 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 MORN5Q5VZ52 161 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 PAMR1Q6UXH9 720 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 OOSP2Q86WS3 158 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 CDC20BQ86Y33 519 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 C9orf85Q96MD7 179 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 COL21A1Q96P44 957 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 C2orf88Q9BSF0 95 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 CXorf21Q9HAI6 301 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 DDIT4Q9NX09 232 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 UGT2A1Q9Y4X1 527 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 OVOS2A0A0G2JMS6 1433 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 OVOS2A0A0J9YW53 1432 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 TROQ12816 1431 aaPredicted RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 OVOS2Q6IE36 1432 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 USP42Q9H9J4 1324 aaKnown RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 NUP188Q5SRE5 1749 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 NPIPB9F8W1W9 429 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 H3BSA7 217 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 SLC31A1O15431 190 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 NDUFS5O43920 106 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 FADS1O60427 444 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 IFNGP01579 166 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 APOA2P02652 100 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 CXCL3P19876 107 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 IGFBP5P24593 272 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 IL2RGP31785 369 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 BTCP35070 178 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 CCL7P80098 99 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 APOFQ13790 326 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 C9orf139Q6ZV77 190 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 CPNE9Q8IYJ1 553 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 TCTE3Q8IZS6 198 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 BPIFB6Q8NFQ5 453 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 BEST4Q8NFU0 473 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 DCPSQ96C86 337 aaKnown RBP2.93□□□□□ -1.94
XRN1-202ENST00000392981 RDH12Q96NR8 316 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 NIPSNAP1Q9BPW8 284 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 NUBP2Q9Y5Y2 271 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 C9orf84Q5VXU9 1444 aa2.93□□□□□ -1.94
XRN1-202ENST00000392981 BORCS7-ASMTA0A0B4J1R7 106 aa2.92□□□□□ -1.94
XRN1-202ENST00000392981 A0A0B4J2E0 115 aa2.92□□□□□ -1.94
XRN1-202ENST00000392981 A0A1B0GX12 115 aa2.92□□□□□ -1.94
XRN1-202ENST00000392981 SMIM1B2RUZ4 78 aa2.92□□□□□ -1.94
XRN1-202ENST00000392981 PHYHO14832 338 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms