RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 SLC25A40Q8TBP6 338 aa10.63□□□□□ -0.71
CIITA-202ENST00000381835 CA5BP1Q8WTZ4 195 aa10.63□□□□□ -0.71
CIITA-202ENST00000381835 BBC3Q96PG8 261 aaPredicted RBP10.63□□□□□ -0.71
CIITA-202ENST00000381835 C12orf57Q99622 126 aa10.63□□□□□ -0.71
CIITA-202ENST00000381835 CYTL1Q9NRR1 136 aa10.63□□□□□ -0.71
CIITA-202ENST00000381835 ERRFI1Q9UJM3 462 aaPredicted RBP10.63□□□□□ -0.71
CIITA-202ENST00000381835 ZNF816-ZNF321PA0A0X1KG74 233 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 J3QW42 95 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 PRB1P04280 392 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 CDSNQ15517 529 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 SLC9A3R2Q15599 337 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 MICBQ29980 383 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 OR2T2Q6IF00 324 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 WFDC8Q8IUA0 241 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 OR4A4PQ8NGN8 299 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 GPER1Q99527 375 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 SPOCK3Q9BQ16 436 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 NICN1Q9BSH3 213 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 PAPOLGQ9BWT3 736 aaKnown RBP10.62□□□□□ -0.71
CIITA-202ENST00000381835 SEC11CQ9BY50 192 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 OPA3Q9H6K4 179 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 BIN3Q9NQY0 253 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 UQCC1Q9NVA1 299 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 ROS1P08922 2347 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 CD300LBA8K4G0 201 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 ZNF850A8MQ14 1090 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 H0YIZ8 118 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 ADAP1O75689 374 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 CRYAAP02489 173 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 NPY4RP50391 375 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 IL34Q6ZMJ4 242 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 MICU1Q9BPX6 476 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 USB1Q9BQ65 265 aaKnown RBP10.62□□□□□ -0.71
CIITA-202ENST00000381835 HRH4Q9H3N8 390 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 OR2S2Q9NQN1 319 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 ZFP57Q9NU63 452 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 CRIM1Q9NZV1 1036 aa10.62□□□□□ -0.71
CIITA-202ENST00000381835 CHRM2P08172 466 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 FAM157CP0CG43 387 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 NPBWR1P48145 328 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 PJVKQ0ZLH3 352 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 KISS1Q15726 138 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 PLCXD3Q63HM9 321 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 TMEM42Q69YG0 159 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 OR5D18Q8NGL1 313 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 NUDT16L1Q9BRJ7 211 aaKnown RBP10.61□□□□□ -0.71
CIITA-202ENST00000381835 FZR1Q9UM11 496 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 GPR132Q9UNW8 380 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 FAM230AA0A1W2PPH8 454 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 MSGN1A6NI15 193 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 TMEM14DPA8MWL7 114 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 LILRA1O75019 489 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 SFT2D2O95562 160 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 PRSS54Q6PEW0 395 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 GLIPR1L1Q6UWM5 242 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 CLEC18BQ6UXF7 455 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 FBXW12Q6X9E4 464 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 CSNK2A3Q8NEV1 391 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 KLF14Q8TD94 323 aaPredicted RBP10.61□□□□□ -0.71
CIITA-202ENST00000381835 RAB3CQ96E17 227 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 CPNE2Q96FN4 548 aaPredicted RBP10.61□□□□□ -0.71
CIITA-202ENST00000381835 WFIKKN1Q96NZ8 548 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 BCL2L14Q9BZR8 327 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 C5orf66Q9H5L9 145 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 ESRP2Q9H6T0 727 aaKnown RBP10.61□□□□□ -0.71
CIITA-202ENST00000381835 METTL8Q9H825 291 aaKnown RBP10.61□□□□□ -0.71
CIITA-202ENST00000381835 RAB18Q9NP72 206 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 PRR13Q9NZ81 148 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 OR5AC2Q9NZP5 309 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 LPAR3Q9UBY5 353 aa10.61□□□□□ -0.71
CIITA-202ENST00000381835 SOCS1O15524 211 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 MPIG6BO95866 241 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 THBDP07204 575 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 PRF1P14222 555 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 PI3P19957 117 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 GRNP28799 593 aaKnown RBP10.6□□□□□ -0.71
CIITA-202ENST00000381835 OR3A4PP47883 348 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 FABP6P51161 128 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 MTCP1P56278 107 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 CNN3Q15417 329 aaKnown RBP10.6□□□□□ -0.71
CIITA-202ENST00000381835 MST1LQ2TV78 715 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 C3orf36Q3SXR2 165 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 ARRDC1Q8N5I2 433 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 TMEM230Q96A57 120 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 LPAR5Q9H1C0 372 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 FBLN5Q9UBX5 448 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 FAM96BQ9Y3D0 163 aa10.6□□□□□ -0.71
CIITA-202ENST00000381835 ANKHD1Q8IWZ3 2542 aaKnown RBP10.6□□□□□ -0.71
CIITA-202ENST00000381835 GSTP1P09211 210 aaKnown RBP10.59□□□□□ -0.71
CIITA-202ENST00000381835 CD40P25942 277 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 MPV17P39210 176 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 PDZK1IP1Q13113 114 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 PRDX4Q13162 271 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 ACTBL2Q562R1 376 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 VAX1Q5SQQ9 334 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 AVPI1Q5T686 147 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 TMEM200AQ86VY9 491 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 ARL6IP6Q8N6S5 226 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 TMEM104Q8NE00 496 aa10.59□□□□□ -0.71
CIITA-202ENST00000381835 C2CD4CQ8TF44 421 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms