RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CCL28Q9NRJ3 127 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 TMEM38BQ9NVV0 291 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 TINAGQ9UJW2 476 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 PTP4A3O75365 173 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 USF1P22415 310 aaPredicted RBP14.09□□□□□ -0.15
COL2A1-202ENST00000380518 PEBP1P30086 187 aaKnown RBP14.09□□□□□ -0.15
COL2A1-202ENST00000380518 TCTEX1D1Q8N7M0 179 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 TMEM52Q8NDY8 209 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 UCN2Q96RP3 112 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 PNLIPP16233 465 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 ORM2P19652 201 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 OR2T10Q8NGZ9 312 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 FSCN3Q9NQT6 498 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 CD3EP07766 207 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 BCL3P20749 454 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 SLC2A8Q9NY64 477 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 ST6GALNAC2Q9UJ37 374 aa14.09□□□□□ -0.15
COL2A1-202ENST00000380518 IGHV5-10-1A0A0J9YXX1 117 aa14.08□□□□□ -0.15
COL2A1-202ENST00000380518 LIFP15018 202 aa14.08□□□□□ -0.15
COL2A1-202ENST00000380518 RPL13AP40429 203 aaKnown RBP14.08□□□□□ -0.15
COL2A1-202ENST00000380518 AWAT1Q58HT5 328 aa14.08□□□□□ -0.15
COL2A1-202ENST00000380518 SPNS3Q6ZMD2 512 aa14.08□□□□□ -0.15
COL2A1-202ENST00000380518 PTX4Q96A99 478 aa14.08□□□□□ -0.15
COL2A1-202ENST00000380518 ABHD3Q8WU67 409 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 LINC00052Q96N35 136 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 SLC7A10Q9NS82 523 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 SNCGO76070 127 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 NHLH1Q02575 133 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 NHLH2Q02577 135 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 COL13A1Q5TAT6 717 aaPredicted RBP14.08□□□□□ -0.16
COL2A1-202ENST00000380518 A0A1W2PQF6 199 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 K7ESF4 209 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 TMPRSS2O15393 492 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 OR4A8P0C604 315 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 MGAT2Q10469 447 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 PMS2P11Q13670 270 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 TNXAQ16473 311 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 TMEM183BQ1AE95 376 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 OR52L2PQ8NGH6 319 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 DTX4Q9Y2E6 619 aa14.08□□□□□ -0.16
COL2A1-202ENST00000380518 ZNF154Q13106 437 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 Q1RN00 199 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 COX19Q49B96 90 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 OR2W1Q9Y3N9 320 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 CDRT15L2A8MXV6 281 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 CD1AP06126 327 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 SULT1A1P50225 295 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 LYZP61626 148 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 GGTLC2Q14390 218 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 PDPNQ86YL7 162 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 ZBTB34Q8NCN2 500 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 SEC11CQ9BY50 192 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 DUSP15Q9H1R2 295 aaPredicted RBP14.07□□□□□ -0.16
COL2A1-202ENST00000380518 ICE1Q9Y2F5 2266 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 C3AR1Q16581 482 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 LGALSLQ3ZCW2 172 aaPredicted RBP14.07□□□□□ -0.16
COL2A1-202ENST00000380518 ADAT3Q96EY9 351 aaPredicted RBP14.07□□□□□ -0.16
COL2A1-202ENST00000380518 LEUTXA8MZ59 168 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 C11orf94C9JXX5 98 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 AP4M1O00189 453 aa14.07□□□□□ -0.16
COL2A1-202ENST00000380518 ALX4Q9H161 411 aaPredicted RBP14.07□□□□□ -0.16
COL2A1-202ENST00000380518 OR5AL1P0C617 328 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 CAMPP49913 170 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 OR10G8Q8NGN5 311 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 ZNF721Q8TF20 911 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 RNF7Q9UBF6 113 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 PRSS50Q9UI38 385 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 VAX2Q9UIW0 290 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 CENPVL1A0A0U1RR11 272 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 B4DEV8 164 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 HOGA1Q86XE5 327 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 TGIF2LXQ8IUE1 241 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 EWSR1Q01844 656 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL2A1-202ENST00000380518 GAMTQ14353 236 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 MOGAT3Q86VF5 341 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 OR4A4PQ8NGN8 299 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 NEURL1O76050 574 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 SPINK2P20155 84 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 EFNB2P52799 333 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 PIGYQ3MUY2 71 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 LYZL2Q7Z4W2 148 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 SMRP1Q8NCR6 262 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 APOBEC4Q8WW27 367 aaKnown RBP14.06□□□□□ -0.16
COL2A1-202ENST00000380518 ANAPC16Q96DE5 110 aa14.06□□□□□ -0.16
COL2A1-202ENST00000380518 A0A1B0GU03 582 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 C7orf66A4D0T2 115 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 LINC00596Q86U02 117 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 LRRC3BQ96PB8 259 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 PPP1R3EQ9H7J1 279 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 ARG1P05089 322 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 NGFRP08138 427 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 ERVS71-1P61550 626 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 INO80CQ6PI98 192 aaPredicted RBP14.05□□□□□ -0.16
COL2A1-202ENST00000380518 SAP30LQ9HAJ7 183 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 ZNF71Q9NQZ8 489 aaPredicted RBP14.05□□□□□ -0.16
COL2A1-202ENST00000380518 SIPA1L3O60292 1781 aaPredicted RBP14.05□□□□□ -0.16
COL2A1-202ENST00000380518 NKX2-6A6NCS4 301 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 RPL36A-HNRNPH2H7BZ11 118 aa14.05□□□□□ -0.16
COL2A1-202ENST00000380518 NANOS3P60323 173 aaKnown RBP14.05□□□□□ -0.16
COL2A1-202ENST00000380518 MRGPRFQ96AM1 343 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms