RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 DOLPP1Q86YN1 238 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 NRIP2Q9BQI9 281 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 CXXC4Q9H2H0 198 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 NAA60Q9H7X0 242 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 TUBG2Q9NRH3 451 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 UFSP2Q9NUQ7 469 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 OR14J1Q9UGF5 321 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 TNFSF18Q9UNG2 199 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 ATP23Q9Y6H3 246 aa12.54□□□□□ -0.4
RAB3IP-203ENST00000378809 FAM87AP0C7U9 286 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 KITLGP21583 273 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 TDGF1P3P51864 188 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 ERVK11-1P61568 191 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 FAM27E3Q08E93 113 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 SRSF7Q16629 238 aaKnown RBP eCLIP12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 PRAMEF6Q5VXH4 476 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 TMEM65Q6PI78 240 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 VHLLQ6RSH7 139 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 FIP1L1Q6UN15 594 aaKnown RBP12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 C20orf204Q6ZNR8 217 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 Q6ZS49 121 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 INO80EQ8NBZ0 244 aaPredicted RBP12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 OR11L1Q8NGX0 322 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 MRPL30Q8TCC3 161 aaKnown RBP12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 SECTM1Q8WVN6 248 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 PIK3IP1Q96FE7 263 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 OR10C1Q96KK4 312 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
RAB3IP-203ENST00000378809 hCG_1807616A0A1W2PRN6 198 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 CRYAAP02489 173 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 OR5AC1P0C628 307 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 RCC1P18754 421 aaPredicted RBP12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 SPIN3Q5JUX0 258 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 MBNL2Q5VZF2 373 aaKnown RBP12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 Q6P435 159 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 Q6ZR03 302 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 FAM219AQ8IW50 185 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 DCUN1D4Q92564 292 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 VRK1Q99986 396 aaPredicted RBP12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 SYT3Q9BQG1 590 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 RASL12Q9NYN1 266 aa12.52□□□□□ -0.4
RAB3IP-203ENST00000378809 A0A0D9SG52 128 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 KANTRA0A1W2PQU2 76 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 SH2D1BO14796 132 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 KCNAB3O43448 404 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 SPDEFO95238 335 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 HERPUD1Q15011 391 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 ALKAL2Q6UX46 152 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 C1orf174Q8IYL3 243 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 PRR18Q8N4B5 295 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 ZNF565Q8N9K5 539 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 CCDC71LQ8N9Z2 235 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 GTF3AQ92664 365 aaKnown RBP12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 C2orf50Q96LR7 162 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 IFT22Q9H7X7 185 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 ACACAQ13085 2346 aa12.52□□□□□ -0.41
RAB3IP-203ENST00000378809 CEP295Q9C0D2 2601 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 A8MXE2 369 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 SLC33A1O00400 549 aaPredicted RBP12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 WNT9BO14905 357 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 OR2F2O95006 317 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 IFNA21P01568 189 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 GLAP06280 429 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 UCP3P55916 312 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 TMPRSS3P57727 454 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 S100A10P60903 97 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 HOXA4Q00056 320 aaPredicted RBP12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 OR2F1Q13607 317 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 PRR30Q53SZ7 412 aaPredicted RBP12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 ACOT7LQ6ZUV0 252 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 POC1AQ8NBT0 407 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 OR2Z1Q8NG97 314 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 IL1F10Q8WWZ1 152 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 SNRNP40Q96DI7 357 aaKnown RBP12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 MEMO1Q9Y316 297 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 SPEF1Q9Y4P9 236 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 ESPL1Q14674 2120 aa12.51□□□□□ -0.41
RAB3IP-203ENST00000378809 TRAV39A0A0B4J263 110 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 A0A0G2JNJ9 132 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 PHF1O43189 567 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 HAND1O96004 215 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 CTXN2P0C2S0 81 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 MDH2P40926 338 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 HLA-DRB3P79483 266 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 ZNF146Q15072 292 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 IAH1Q2TAA2 248 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 LRP11Q86VZ4 500 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 FOXRED2Q8IWF2 684 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 SPERTQ8NA61 448 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 RSRP1Q9BUV0 290 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 Q9UFV3 132 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 IGKV1-6A0A0C4DH72 117 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 RNF222A6NCQ9 220 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 ZNF345Q14585 488 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 SLC51BQ86UW2 128 aa12.5□□□□□ -0.41
RAB3IP-203ENST00000378809 KCNRGQ8N5I3 272 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms