RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 UCNP55089 124 aa16.6■□□□□ 0.25
SSU72-204ENST00000378726 BLOC1S1P78537 153 aa16.6■□□□□ 0.25
SSU72-204ENST00000378726 HFEQ30201 348 aa16.6■□□□□ 0.25
SSU72-204ENST00000378726 HAGHLQ6PII5 290 aaPredicted RBP16.6■□□□□ 0.25
SSU72-204ENST00000378726 CLEC18BQ6UXF7 455 aa16.6■□□□□ 0.25
SSU72-204ENST00000378726 DOLPP1Q86YN1 238 aa16.6■□□□□ 0.25
SSU72-204ENST00000378726 OR4A4PQ8NGN8 299 aa16.6■□□□□ 0.25
SSU72-204ENST00000378726 RNF141Q8WVD5 230 aa16.6■□□□□ 0.25
SSU72-204ENST00000378726 ARL11Q969Q4 196 aa16.6■□□□□ 0.25
SSU72-204ENST00000378726 OR5AC2Q9NZP5 309 aa16.6■□□□□ 0.25
SSU72-204ENST00000378726 CA11O75493 328 aa16.59■□□□□ 0.25
SSU72-204ENST00000378726 FAM157CP0CG43 387 aa16.59■□□□□ 0.25
SSU72-204ENST00000378726 GLI4P10075 376 aa16.59■□□□□ 0.25
SSU72-204ENST00000378726 RPL35P42766 123 aaKnown RBP16.59■□□□□ 0.25
SSU72-204ENST00000378726 NAAAQ02083 359 aa16.59■□□□□ 0.25
SSU72-204ENST00000378726 SLAMF9Q96A28 289 aa16.59■□□□□ 0.25
SSU72-204ENST00000378726 TLNRD1Q9H1K6 362 aa16.59■□□□□ 0.25
SSU72-204ENST00000378726 HSF4Q9ULV5 492 aa16.59■□□□□ 0.25
SSU72-204ENST00000378726 CECR9P0C854 216 aa16.58■□□□□ 0.25
SSU72-204ENST00000378726 CYCSP99999 105 aaKnown RBP16.58■□□□□ 0.25
SSU72-204ENST00000378726 PPA1Q15181 289 aa16.58■□□□□ 0.25
SSU72-204ENST00000378726 MST1LQ2TV78 715 aa16.58■□□□□ 0.25
SSU72-204ENST00000378726 VAX1Q5SQQ9 334 aa16.58■□□□□ 0.25
SSU72-204ENST00000378726 C10orf91Q5T1B1 145 aa16.58■□□□□ 0.25
SSU72-204ENST00000378726 SNRNP40Q96DI7 357 aaKnown RBP16.58■□□□□ 0.25
SSU72-204ENST00000378726 C12orf57Q99622 126 aa16.58■□□□□ 0.25
SSU72-204ENST00000378726 SFXN3Q9BWM7 321 aa16.58■□□□□ 0.25
SSU72-204ENST00000378726 RAC2P15153 192 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 BCL3P20749 454 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 SUPT4H1P63272 117 aaKnown RBP16.58■□□□□ 0.24
SSU72-204ENST00000378726 PDCD1Q15116 288 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 ANKRD55Q3KP44 614 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 BRICD5Q6PL45 260 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 GFRALQ6UXV0 394 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 TMEM200AQ86VY9 491 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 SAXO1Q8IYX7 474 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 Q8NFD4 153 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 OR10AD1Q8NGE0 317 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 CNTNAP3BQ96NU0 1288 aa16.58■□□□□ 0.24
SSU72-204ENST00000378726 RTBDNQ9BSG5 229 aaPredicted RBP16.58■□□□□ 0.24
SSU72-204ENST00000378726 AMY2BP19961 511 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 CHATP28329 748 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 SNU13P55769 128 aaKnown RBP16.57■□□□□ 0.24
SSU72-204ENST00000378726 GNG3P63215 75 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 MKXQ8IYA7 352 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 MAFIPQ8WZ33 124 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 TREM1Q9NP99 234 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 MTCH1Q9NZJ7 389 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 AMDHD2Q9Y303 409 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 SLC25A15Q9Y619 301 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 OR5B21A6NL26 309 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 IGLV1-44P01699 117 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 RBM11P57052 281 aaKnown RBP16.57■□□□□ 0.24
SSU72-204ENST00000378726 PSG7Q13046 419 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 ZNF573Q86YE8 665 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 KLF14Q8TD94 323 aaPredicted RBP16.57■□□□□ 0.24
SSU72-204ENST00000378726 EMG1Q92979 244 aaKnown RBP16.57■□□□□ 0.24
SSU72-204ENST00000378726 OR10C1Q96KK4 312 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 SULT4A1Q9BR01 284 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 RAB18Q9NP72 206 aa16.57■□□□□ 0.24
SSU72-204ENST00000378726 CARHSP1Q9Y2V2 147 aaKnown RBP16.57■□□□□ 0.24
SSU72-204ENST00000378726 PRR14LQ5THK1 2151 aa16.56■□□□□ 0.24
SSU72-204ENST00000378726 ALKBH6Q3KRA9 238 aa16.56■□□□□ 0.24
SSU72-204ENST00000378726 ACTBL2Q562R1 376 aa16.56■□□□□ 0.24
SSU72-204ENST00000378726 DHRS7BQ6IAN0 325 aaPredicted RBP16.56■□□□□ 0.24
SSU72-204ENST00000378726 PRSS54Q6PEW0 395 aa16.56■□□□□ 0.24
SSU72-204ENST00000378726 ARRDC1Q8N5I2 433 aa16.56■□□□□ 0.24
SSU72-204ENST00000378726 OR13G1Q8NGZ3 307 aa16.56■□□□□ 0.24
SSU72-204ENST00000378726 HDHD3Q9BSH5 251 aaPredicted RBP16.56■□□□□ 0.24
SSU72-204ENST00000378726 MMP26Q9NRE1 261 aa16.56■□□□□ 0.24
SSU72-204ENST00000378726 AK3Q9UIJ7 227 aa16.56■□□□□ 0.24
SSU72-204ENST00000378726 IGHV1-18A0A0C4DH31 117 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 CEACAM18A8MTB9 384 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 ZNF705EA8MWA4 302 aaPredicted RBP16.55■□□□□ 0.24
SSU72-204ENST00000378726 TRAPPC2LH3BP13 241 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 SYNGR1O43759 233 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 LYL1P12980 280 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 NPBWR1P48145 328 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 OR5H2Q8NGV7 314 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 S100PBPQ96BU1 408 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 MARS2Q96GW9 593 aaKnown RBP16.55■□□□□ 0.24
SSU72-204ENST00000378726 OR2S2Q9NQN1 319 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 ZNF701Q9NV72 531 aaPredicted RBP16.55■□□□□ 0.24
SSU72-204ENST00000378726 IGF2RP11717 2491 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 SDCBPO00560 298 aaPredicted RBP16.55■□□□□ 0.24
SSU72-204ENST00000378726 PVALBP20472 110 aaPredicted RBP16.55■□□□□ 0.24
SSU72-204ENST00000378726 FPR2P25090 351 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 IGFBP7Q16270 282 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 ALKBH2Q6NS38 261 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 FAM169BQ8N8A8 192 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 POM121Q96HA1 1249 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 HS3ST6Q96QI5 342 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 CMSS1Q9BQ75 279 aaKnown RBP16.55■□□□□ 0.24
SSU72-204ENST00000378726 FAM96BQ9Y3D0 163 aa16.55■□□□□ 0.24
SSU72-204ENST00000378726 OR7C1O76099 320 aaPredicted RBP16.54■□□□□ 0.24
SSU72-204ENST00000378726 SELEP16581 610 aa16.54■□□□□ 0.24
SSU72-204ENST00000378726 BMP5P22003 454 aa16.54■□□□□ 0.24
SSU72-204ENST00000378726 GLRA1P23415 457 aa16.54■□□□□ 0.24
SSU72-204ENST00000378726 MPV17P39210 176 aa16.54■□□□□ 0.24
SSU72-204ENST00000378726 RAB13P51153 203 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms