RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 FAM90A5PA8MXJ8 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A23PA8MXZ1 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 DNPH1O43598 174 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A15PP0C7V4 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A13PP0C7W8 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A14PP0C7W9 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A24PP0C7X0 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM78BQ5VT40 261 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 SLC25A47Q6Q0C1 308 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 OR4A4PQ8NGN8 299 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 MOB3AQ96BX8 217 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FBXO17Q96EF6 278 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 ALKBH3Q96Q83 286 aaPredicted RBP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 UBE2ZQ9H832 354 aaPredicted RBP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CT45A6P0DMU7 189 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CT45A5P0DMU8 189 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CT45A7P0DMV0 189 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 PNLIPP16233 465 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 HOXA6P31267 233 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 UBE2G2P60604 165 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 KRTDAPP60985 99 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 ZNF816Q0VGE8 651 aaPredicted RBP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 HIKESHIQ53FT3 197 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CT45A1Q5HYN5 189 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 TMEM92Q6UXU6 159 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 NUFIP2Q7Z417 695 aaKnown RBP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CYB561D1Q8N8Q1 229 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 OR2M3Q8NG83 312 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CT45A3Q8NHU0 189 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 ADIPOR1Q96A54 375 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 ACY3Q96HD9 319 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 GGACTQ9BVM4 153 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 TMEM222Q9H0R3 208 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 MPC1Q9Y5U8 109 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CCDC88CQ9P219 2028 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 NLRC5Q86WI3 1866 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 OTOL1A6NHN0 477 aaPredicted RBP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 DHRS7CA6NNS2 312 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 LINC01565O15544 149 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CLN5O75503 358 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 IGHV3-9P01782 118 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 NAT2P11245 290 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 UCP3P55916 312 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 UBE2G1P62253 170 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 NHLH2Q02577 135 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 EGR4Q05215 589 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 C6orf15Q6UXA7 325 aaPredicted RBP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CRISPLD2Q9H0B8 497 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FKBP11Q9NYL4 201 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 CTXND1A0A1B0GTU2 59 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 H0Y980 276 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 HNF1AP20823 631 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 SRD5A2P31213 254 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 RBM11P57052 281 aaKnown RBP7.67□□□□□ -1.18
PCDH9-202ENST00000377865 BPIFB3P59826 476 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 TMEM187Q14656 261 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 RTL8BQ17RB0 113 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 CLEC12BQ2HXU8 276 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.67□□□□□ -1.18
PCDH9-202ENST00000377865 C16orf82Q7Z2V1 217 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 TCTEX1D1Q8N7M0 179 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 FGF11Q92914 225 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 WNT2BQ93097 391 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 FER1L6-AS2Q96M78 137 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 TUBD1Q9UJT1 453 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 A0A087WWC5 75 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 NKX6-3A6NJ46 265 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 LMX1BO60663 402 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 ZNF708P17019 499 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 CEACAM6P40199 344 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 WDR74Q6RFH5 385 aaPredicted RBP7.67□□□□□ -1.18
PCDH9-202ENST00000377865 ZBTB34Q8NCN2 500 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 ZNRF4Q8WWF5 429 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 IL22RA2Q969J5 263 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 SLC25A22Q9H936 323 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 MS4A18H0YCH9 400 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 UBE2CO00762 179 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 ACTL6AO96019 429 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 DDTP30046 118 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 GLIPR1P48060 266 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 ERVFC1-1P60608 527 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 SRSF4Q08170 494 aaKnown RBP7.67□□□□□ -1.18
PCDH9-202ENST00000377865 PLPPR5Q32ZL2 321 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 MS4A18Q3C1V0 323 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 REC114Q7Z4M0 266 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 RHBDD1Q8TEB9 315 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 FBLN5Q9UBX5 448 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 SSUH2Q9Y2M2 353 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 PTPRDP23468 1912 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 SRFP11831 508 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 CNEP1R1Q8N9A8 125 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 TMEM178AQ8NBL3 297 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 SLC25A28Q96A46 364 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 S1PR3Q99500 378 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 FAM234AQ9H0X4 552 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 A0A096LPE4 126 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 A0A1W2PPZ6 126 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 LOC390937A0A1W2PQ73 354 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 APOA2P02652 100 aa7.67□□□□□ -1.18
PCDH9-202ENST00000377865 BCL3P20749 454 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms