RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 OGG1O15527 345 aa11.93□□□□□ -0.5
GPC6-201ENST00000377047 PRR19A6NJB7 356 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 J3KRW8 73 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 MVDP53602 400 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 ST3GAL2Q16842 350 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 FA2HQ7L5A8 372 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 CHODLQ9H9P2 273 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 RHOFQ9HBH0 211 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 CST4P01036 141 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 REG1BP48304 166 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 HARBI1Q96MB7 349 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 SLIRPQ9GZT3 109 aaKnown RBP11.92□□□□□ -0.5
GPC6-201ENST00000377047 PRR13Q9NZ81 148 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 PCMT1P22061 227 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 ACAA2P42765 397 aaKnown RBP11.92□□□□□ -0.5
GPC6-201ENST00000377047 GNG4P50150 75 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 DYRK2Q92630 601 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 ANGPTL4Q9BY76 406 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 RAB33BQ9H082 229 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 CACNA1CQ13936 2221 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 CDC34P49427 236 aaPredicted RBP11.92□□□□□ -0.5
GPC6-201ENST00000377047 RSPO4Q2I0M5 234 aaPredicted RBP11.92□□□□□ -0.5
GPC6-201ENST00000377047 GAPTQ8N292 157 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 DNASE2BQ8WZ79 361 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 ZNF586Q9NXT0 402 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 LPAR3Q9UBY5 353 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 SPAG17Q6Q759 2223 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 A0A1W2PPE3 182 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 B3GALNT1O75752 331 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 ASCL3Q9NQ33 180 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 PILRAQ9UKJ1 303 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 RGPD3A6NKT7 1758 aaPredicted RBP11.92□□□□□ -0.5
GPC6-201ENST00000377047 MYO16Q9Y6X6 1858 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 MED19A0JLT2 244 aaPredicted RBP11.92□□□□□ -0.5
GPC6-201ENST00000377047 ACP1P24666 158 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 HLA-DRB3P79483 266 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 ZNF429Q86V71 674 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 OR2C3Q8N628 320 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 NHLRC2Q8NBF2 726 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 RNF133Q8WVZ7 376 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 WIPI2Q9Y4P8 454 aa11.92□□□□□ -0.5
GPC6-201ENST00000377047 MAP1LC3B2A6NCE7 125 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 RPL31P62899 125 aaKnown RBP11.91□□□□□ -0.5
GPC6-201ENST00000377047 WFDC3Q8IUB2 231 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 SLC26A10Q8NG04 563 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 ZNF488Q96MN9 340 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 MAP1LC3BQ9GZQ8 125 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 COL11A1P12107 1806 aaPredicted RBP11.91□□□□□ -0.5
GPC6-201ENST00000377047 IL13RA2Q14627 380 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 OR10G4Q8NGN3 311 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 OR10G9Q8NGN4 311 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 OR10G7Q8NGN6 311 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 CISD1Q9NZ45 108 aaKnown RBP11.91□□□□□ -0.5
GPC6-201ENST00000377047 PIPOXQ9P0Z9 390 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 PRSS50Q9UI38 385 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 LOC102723971A0A1B0GUV8 181 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 SPINK4O60575 86 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 UCP2P55851 309 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 POLR2GP62487 172 aaKnown RBP eCLIP11.91□□□□□ -0.5
GPC6-201ENST00000377047 C19orf57Q0VDD7 668 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 MMDQ15546 238 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 MPV17LQ2QL34 196 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 CCL28Q9NRJ3 127 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 EIF4EBP2Q13542 120 aaPredicted RBP11.91□□□□□ -0.5
GPC6-201ENST00000377047 CDCP2Q5VXM1 449 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 RNF122Q9H9V4 155 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 SNCGO76070 127 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 CTSDP07339 412 aaPredicted RBP11.91□□□□□ -0.5
GPC6-201ENST00000377047 AMTP48728 403 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 CCL13Q99616 98 aa11.91□□□□□ -0.5
GPC6-201ENST00000377047 ANKRD20A5PA0PJZ0 165 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 TRIM77I1YAP6 450 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 CTSSP25774 331 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 DYNLT3P51808 116 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 P2RY6Q15077 328 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 GABRA6Q16445 453 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 ZBTB44Q8NCP5 570 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 PRDX2P32119 198 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 FGF8P55075 233 aaPredicted RBP11.9□□□□□ -0.5
GPC6-201ENST00000377047 PDPNQ86YL7 162 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 ZNF680Q8NEM1 530 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 ZNF737O75373 536 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 UBE2L3P68036 154 aaKnown RBP11.9□□□□□ -0.5
GPC6-201ENST00000377047 INPP5JQ15735 1006 aaPredicted RBP11.9□□□□□ -0.5
GPC6-201ENST00000377047 NSUN5P2Q63ZY6 315 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 DOLPP1Q86YN1 238 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 SLC2A8Q9NY64 477 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 TSPAN2O60636 221 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 SFTA3P0C7M3 94 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 PSG4Q00888 419 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 FHL5Q5TD97 284 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 CCDC144NLQ6NUI1 221 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 WDFY2Q96P53 400 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 FOXJ2Q9P0K8 574 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 HS3ST3B1Q9Y662 390 aa11.9□□□□□ -0.5
GPC6-201ENST00000377047 TPPP2P59282 170 aa11.9□□□□□ -0.51
GPC6-201ENST00000377047 ATP6V1FQ16864 119 aa11.9□□□□□ -0.51
GPC6-201ENST00000377047 LINC00596Q86U02 117 aa11.9□□□□□ -0.51
GPC6-201ENST00000377047 OR2V2Q96R30 315 aa11.9□□□□□ -0.51
GPC6-201ENST00000377047 DIRC2Q96SL1 478 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms