RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 SNU13P55769 128 aaKnown RBP10.57□□□□□ -0.72
C9orf3-203ENST00000375315 FBXW4P57775 412 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 RANP62826 216 aaKnown RBP10.57□□□□□ -0.72
C9orf3-203ENST00000375315 HIST1H3AP68431 136 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 FAM189A2Q15884 450 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 NUFIP2Q7Z417 695 aaKnown RBP10.57□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF248Q8NDW4 579 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 FOXN4Q96NZ1 517 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 ABHD6Q9BV23 337 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 ELOVL1Q9BW60 279 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 TBL1XR1Q9BZK7 514 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 ST8SIA3O43173 380 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 LMX1BO60663 402 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 PNMTP11086 282 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF43P17038 809 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 SFTPDP35247 375 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 RAB7AP51149 207 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 GNMTQ14749 295 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 CHRFAM7AQ494W8 412 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 MMP25Q9NPA2 562 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 LOC102723971A0A1B0GUV8 181 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 SPAARA0A1B0GVQ0 90 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 A8MXE2 369 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 B4E171 279 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 SHISA8B8ZZ34 492 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 ETV2O00321 342 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-203ENST00000375315 SOCS1O15524 211 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 CLPSP04118 112 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 TCN2P20062 427 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 FAM3BP58499 235 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-203ENST00000375315 PLAC9Q5JTB6 97 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 ANKRD37Q7Z713 158 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 DEFB124Q8NES8 71 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 ADAMTS18Q8TE60 1221 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF524Q96C55 264 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 FAM122AQ96E09 287 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 TBX15Q96SF7 602 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 SDF2L1Q9HCN8 221 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 SERINC1Q9NRX5 453 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 SERINC4A6NH21 518 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 CTSDP07339 412 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-203ENST00000375315 UMODP07911 640 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 ASAH2BP0C7U1 165 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 CD59P13987 128 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 PTTG1IPP53801 180 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 PRAMEF20Q5VT98 475 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 FAM90A2PQ658T7 463 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 FBXW12Q6X9E4 464 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 GBGT1Q8N5D6 347 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 OR52N5Q8NH56 324 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM37Q8WXS4 190 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 OR5B12Q96R08 314 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 PYGO2Q9BRQ0 406 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 LMF2Q9BU23 707 aaKnown RBP10.56□□□□□ -0.72
C9orf3-203ENST00000375315 WWTR1Q9GZV5 400 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 GSX1Q9H4S2 264 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-203ENST00000375315 MSL2Q9HCI7 577 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 FOXJ2Q9P0K8 574 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 VDAC3Q9Y277 283 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 IGKV3D-11A0A0A0MRZ8 115 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 CRYM-AS1A6NIL9 109 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 P2RY10O00398 339 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 CHRNB4P30926 498 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 IGLV3-21P80748 117 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-203ENST00000375315 EWSR1Q01844 656 aaKnown RBP eCLIP10.56□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF141Q15928 474 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 KCNG3Q8TAE7 436 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 GNPNAT1Q96EK6 184 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-203ENST00000375315 SLC46A1Q96NT5 459 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM9BQ9NQ34 198 aa10.56□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF292O60281 2723 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 SVILO95425 2214 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 DUSP1P28562 367 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 KLF3P57682 345 aaPredicted RBP10.55□□□□□ -0.72
C9orf3-203ENST00000375315 SELENOTP62341 195 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM241Q24JQ0 296 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 WFIKKN1Q96NZ8 548 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 A0A0A6YYD4 124 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 RAD51DO75771 328 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 TNFSF13O75888 250 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 OR2J2O76002 312 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 H2BFMP0C1H6 154 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF93P35789 620 aaPredicted RBP10.55□□□□□ -0.72
C9orf3-203ENST00000375315 ASCL1P50553 236 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF41P51814 821 aaPredicted RBP10.55□□□□□ -0.72
C9orf3-203ENST00000375315 KCNMB1Q16558 191 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 TIPARPQ7Z3E1 657 aaKnown RBP10.55□□□□□ -0.72
C9orf3-203ENST00000375315 CMTM1Q8IZ96 169 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM123Q8N131 208 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 FBXL14Q8N1E6 418 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 MS4A10Q96PG2 267 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 TP53RKQ96S44 253 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM59Q9BXS4 323 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 CEP295Q9C0D2 2601 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 BOD1L1Q8NFC6 3051 aa10.55□□□□□ -0.72
C9orf3-203ENST00000375315 SLC16A7O60669 478 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 IGKV3-11P04433 115 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 PFN1P07737 140 aaKnown RBP10.54□□□□□ -0.72
C9orf3-203ENST00000375315 GALNSP34059 522 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms