RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 TMEM200BQ69YZ2 307 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 RAB12Q6IQ22 244 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 METAP1DQ6UB28 335 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-201ENST00000374673 BPIFB2Q8N4F0 458 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 TPRX1Q8N7U7 411 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 PLPPR1Q8TBJ4 325 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 BARHL1Q9BZE3 327 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 SIRPDQ9H106 197 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 DCSTAMPQ9H295 470 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 NCOR1P1Q9H4R4 102 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 OPN4Q9UHM6 478 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 KPTNQ9Y664 436 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 ZANQ9Y493 2812 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 A0A1W2PPH5 198 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 hADV38S2A0JD32 116 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 FOXI3A8MTJ6 420 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-201ENST00000374673 MCRIP1C9JLW8 97 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 INAFM1C9JVW0 142 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 M0R1W7 72 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 SNRPBP14678 240 aaKnown RBP12.36□□□□□ -0.43
HSPG2-201ENST00000374673 MMP9P14780 707 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 CHATP28329 748 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 EFNB2P52799 333 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 ZNF273Q14593 569 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 FAM120AOSQ5T036 256 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 C1orf229Q6ZS94 237 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-201ENST00000374673 TCF23Q7RTU1 214 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 CMTM4Q8IZR5 234 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 TEX29Q8N6K0 151 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 LGALS14Q8TCE9 139 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 WDFY2Q96P53 400 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 NEDD4LQ96PU5 975 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 ABRACLQ9P1F3 81 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 PEX16Q9Y5Y5 336 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 ETV7Q9Y603 341 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 LINC00312Q9Y6C7 94 aa12.36□□□□□ -0.43
HSPG2-201ENST00000374673 ODAMA1E959 279 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 NOL3O60936 208 aaKnown RBP12.35□□□□□ -0.43
HSPG2-201ENST00000374673 PAHP00439 452 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 HNF1AP20823 631 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 BLVRBP30043 206 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-201ENST00000374673 GLIPR1P48060 266 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 VEGFCP49767 419 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 ARF6P62330 175 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 METTL11BQ5VVY1 283 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 SLC35E4Q6ICL7 350 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 C1orf122Q6ZSJ8 110 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 LURAP1LQ8IV03 231 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 OR56B1Q8NGI3 324 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 NDNFQ8TB73 568 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 NEK7Q8TDX7 302 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 CORO2AQ92828 525 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 UPRTQ96BW1 309 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
HSPG2-201ENST00000374673 ONECUT1Q9UBC0 465 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 HSF4Q9ULV5 492 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 SPATA2Q9UM82 520 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 UBE2J1Q9Y385 318 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-201ENST00000374673 CEPT1Q9Y6K0 416 aa12.35□□□□□ -0.43
HSPG2-201ENST00000374673 METTL21EPA6NDL7 271 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 SOCS1O15524 211 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 CA11O75493 328 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 TOX4O94842 621 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 CCL3L1P16619 93 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 DLX6P56179 175 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 TMEM50BP56557 158 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 BLMHQ13867 455 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 SPCS2Q15005 226 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 NKAPLQ5M9Q1 402 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 GAPTQ8N292 157 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 C11orf42Q8N5U0 333 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 Q8N7P7 452 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 OR5H6Q8NGV6 325 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 ISOC1Q96CN7 298 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 TBX15Q96SF7 602 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 RBM38Q9H0Z9 239 aaKnown RBP12.34□□□□□ -0.43
HSPG2-201ENST00000374673 ETAA1Q9NY74 926 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 OR6C3Q9NZP0 311 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 KIF25Q9UIL4 384 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 CDC42EP3Q9UKI2 254 aa12.34□□□□□ -0.43
HSPG2-201ENST00000374673 MEIKINA0A087WXM9 373 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 TRGV10A0A0A0MS01 117 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 TMEM30CPA0ZSE6 113 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 C17orf98A8MV24 154 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 H3BMQ9 156 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 RAB27BO00194 218 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 FSHBP01225 129 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 RBP4P02753 201 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 ZNF728P0DKX0 622 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 RORCP51449 518 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 DYNC1I2Q13409 638 aaKnown RBP12.33□□□□□ -0.44
HSPG2-201ENST00000374673 ZNF497Q6ZNH5 498 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 Q6ZTK2 550 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 C6orf201Q7Z4U5 140 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 VMO1Q7Z5L0 202 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 TRAPPC6BQ86SZ2 158 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 OR10R2Q8NGX6 335 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 ZNF714Q96N38 554 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms