RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 CD5P06127 495 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 CRHP06850 196 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 PPT1P50897 306 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 DHRS2Q13268 280 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 ACTBL2Q562R1 376 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 PLAC9Q5JTB6 97 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 INO80EQ8NBZ0 244 aaPredicted RBP12.27□□□□□ -0.44
HMGA1-203ENST00000374116 SMIM8Q96KF7 97 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 BANF2Q9H503 90 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 KCNJ16Q9NPI9 418 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 LPAR3Q9UBY5 353 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 PIGLQ9Y2B2 252 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 PRR14LQ5THK1 2151 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 HCFC1P51610 2035 aa12.27□□□□□ -0.44
HMGA1-203ENST00000374116 SYNGR3O43761 229 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 IL18BPO95998 194 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 CBR1P16152 277 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 MAS1LP35410 378 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 OR3A2P47893 321 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 RAB5CP51148 216 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 RAB2AP61019 212 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 DEFA6Q01524 100 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 UBE2V2Q15819 145 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 SLC22A6Q4U2R8 563 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 C1QL4Q86Z23 238 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 OR4K15Q8NH41 348 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 PPP1R1CQ8WVI7 109 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 C14orf79Q96F83 325 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 GP6Q9HCN6 339 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.27□□□□□ -0.45
HMGA1-203ENST00000374116 JKAMPQ9P055 326 aa12.27□□□□□ -0.45
HMGA1-203ENST00000374116 FAM157AC9JC47 383 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 LYZL6O75951 148 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 HLA-AP01891 365 aaKnown RBP12.26□□□□□ -0.45
HMGA1-203ENST00000374116 DBHP09172 617 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 FAHP16930 419 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 ZBTB25P24278 435 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 COL8A1P27658 744 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 TMEM50BP56557 158 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 TFF3Q07654 80 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 CRIP3Q6Q6R5 217 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 BEND4Q6ZU67 534 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 SLC16A14Q7RTX9 510 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 LYG2Q86SG7 212 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 BOLLQ8N9W6 283 aaKnown RBP12.26□□□□□ -0.45
HMGA1-203ENST00000374116 OR51T1Q8NGJ9 327 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 OR1F12Q8NHA8 337 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 MRGPRFQ96AM1 343 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 RHOFQ9HBH0 211 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 CYTL1Q9NRR1 136 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 KPTNQ9Y664 436 aa12.26□□□□□ -0.45
HMGA1-203ENST00000374116 RTTNQ86VV8 2226 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 A0A1W2PPE3 182 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 MSTNO14793 375 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 PMP2P02689 132 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 ATP1B3P54709 279 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 PCBD1P61457 104 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 ARL6IP1Q15041 203 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 NRN1LQ496H8 165 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 VAX1Q5SQQ9 334 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 HIST2H2BCQ6DN03 193 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 C22orf34Q6ZV56 151 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 CXorf67Q86X51 503 aaPredicted RBP12.25□□□□□ -0.45
HMGA1-203ENST00000374116 SEMA6DQ8NFY4 1073 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 PFDN5Q99471 154 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 S100A13Q99584 98 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 GGACTQ9BVM4 153 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 GPR35Q9HC97 309 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 PARPBPQ9NWS1 579 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 NOP16Q9Y3C1 178 aaKnown RBP12.25□□□□□ -0.45
HMGA1-203ENST00000374116 A0A1W2PP11 408 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 OR6C6A6NF89 314 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 RNASEK-C17orf49H0YIS7 233 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 FBXO24O75426 580 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 IFNA10P01566 189 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 SFTA3P0C7M3 94 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 IGHV1-2P23083 117 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 GLP1RP43220 463 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 ASCL1P50553 236 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 F2RL1P55085 397 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 TAS2R31P59538 309 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 CD81P60033 236 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 SNAI3Q3KNW1 292 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 FBXW9Q5XUX1 488 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 ALKBH2Q6NS38 261 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 HOGA1Q86XE5 327 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 ARRDC1Q8N5I2 433 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 ARHGAP5-AS1Q96IT6 56 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 FOXB1Q99853 325 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 TM2D1Q9BX74 207 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 LINC00470Q9BZP3 86 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 ZNF391Q9UJN7 358 aa12.25□□□□□ -0.45
HMGA1-203ENST00000374116 A0A1W2PR80 420 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 FOXI3A8MTJ6 420 aaPredicted RBP12.24□□□□□ -0.45
HMGA1-203ENST00000374116 TXNL1O43396 289 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 RAD51DO75771 328 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 ZNF14P17017 642 aaPredicted RBP12.24□□□□□ -0.45
HMGA1-203ENST00000374116 ARFRP1Q13795 201 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 CEACAM16Q2WEN9 425 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms