RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 VSTM2LQ96N03 204 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 VAX2Q9UIW0 290 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 SMPD2O60906 423 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 MGPP08493 103 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 SSX8Q7RTT4 187 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 PIPOXQ9P0Z9 390 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 J3QT63 122 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 CORTO00230 105 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 OGG1O15527 345 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 CHST1O43916 411 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 COL9A1P20849 921 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 RASL10BQ96S79 203 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 LPAR5Q9H1C0 372 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 MS4A5Q9H3V2 200 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 HSPB8Q9UJY1 196 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 LIPGQ9Y5X9 500 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 MED19A0JLT2 244 aaPredicted RBP10.16□□□□□ -0.78
VCL-202ENST00000372755 AP4M1O00189 453 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 CA11O75493 328 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 SLC23A3Q6PIS1 610 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 CBLN3Q6UW01 205 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 MSL2Q9HCI7 577 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 DNPH1O43598 174 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 G6PCP35575 357 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 MESTQ5EB52 335 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 OR8I2Q8N0Y5 310 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 OR4X1Q8NH49 305 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 MYOZ3Q8TDC0 251 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 OR2H1Q9GZK4 316 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 PRO1933Q9H354 126 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 INSIG2Q9Y5U4 225 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 TRAV20A0A0B4J274 112 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 A6NDN8 102 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 KCNMB1Q16558 191 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 ATG4DQ86TL0 474 aaPredicted RBP10.15□□□□□ -0.78
VCL-202ENST00000372755 GAPTQ8N292 157 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 SLC25A33Q9BSK2 321 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 NTMQ9P121 344 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 TOGARAM1Q9Y4F4 1720 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 ZNF343Q6P1L6 599 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 SNRNP40Q96DI7 357 aaKnown RBP10.15□□□□□ -0.78
VCL-202ENST00000372755 TMUB1Q9BVT8 246 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 PGA4P0DJD7 388 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 PGA5P0DJD9 388 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 ZNF273Q14593 569 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 ZG16BQ96DA0 208 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 ATG101Q9BSB4 218 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 PCOLCE2Q9UKZ9 415 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 ISLRO14498 428 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 GEMIN2O14893 280 aaKnown RBP10.15□□□□□ -0.78
VCL-202ENST00000372755 SRSF10O75494 262 aaKnown RBP10.15□□□□□ -0.78
VCL-202ENST00000372755 RHBDL1O75783 438 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 TCL1AP56279 114 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
VCL-202ENST00000372755 CCDC144NLQ6NUI1 221 aa10.15□□□□□ -0.78
VCL-202ENST00000372755 C16orf47Q6ZP98 133 aaPredicted RBP10.15□□□□□ -0.78
VCL-202ENST00000372755 CDIPTO14735 213 aa10.15□□□□□ -0.79
VCL-202ENST00000372755 ADAP1O75689 374 aa10.15□□□□□ -0.79
VCL-202ENST00000372755 CXorf1O96002 111 aa10.15□□□□□ -0.79
VCL-202ENST00000372755 MAGEA5P43359 124 aa10.15□□□□□ -0.79
VCL-202ENST00000372755 HELTA6NFD8 242 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 CDC42EP2O14613 210 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 PPYP01298 95 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 INO80CQ6PI98 192 aaPredicted RBP10.14□□□□□ -0.79
VCL-202ENST00000372755 RAB24Q969Q5 203 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 CDRT15L2A8MXV6 281 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 FAM157CP0CG43 387 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 AWAT1Q58HT5 328 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 SLC35E3Q7Z769 313 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 HARBI1Q96MB7 349 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 GPR35Q9HC97 309 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 SIRT7Q9NRC8 400 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 A0A1B0GU03 582 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 CRHP06850 196 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 SLC25A42Q86VD7 318 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 YBX1P67809 324 aaKnown RBP10.14□□□□□ -0.79
VCL-202ENST00000372755 RPL24P83731 157 aaKnown RBP10.14□□□□□ -0.79
VCL-202ENST00000372755 TMEM251Q8N6I4 163 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 TINAGQ9UJW2 476 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 OR2W1Q9Y3N9 320 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 SIAH2O43255 324 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 EML2O95834 649 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 CELA2BP08218 269 aaPredicted RBP10.14□□□□□ -0.79
VCL-202ENST00000372755 HTN1P15515 57 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 CD1BP29016 333 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 KIR3DL2P43630 455 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 ID4P47928 161 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 STPG2Q8N412 459 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 OR5A2Q8NGI9 324 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 OR1L8Q8NGR8 309 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 SSMEM1Q8WWF3 244 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 CCL28Q9NRJ3 127 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 RABAC1Q9UI14 185 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 NUMA1Q14980 2115 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 CLDN18P56856 261 aa10.14□□□□□ -0.79
VCL-202ENST00000372755 RPP25Q9BUL9 199 aaKnown RBP10.14□□□□□ -0.79
VCL-202ENST00000372755 J3KRW8 73 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 M0QZK8 103 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 M0R296 226 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 SOCS1O15524 211 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms