RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 DPRXA6NFQ7 191 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 SLC33A1O00400 549 aaPredicted RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 DNASE1P24855 282 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 RPS23P62266 143 aaKnown RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 LY6DQ14210 128 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 RBM39Q14498 530 aaKnown RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 IGSF11Q5DX21 431 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 LY6G6FQ5SQ64 297 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 MRPL30Q8TCC3 161 aaKnown RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 MRPL37Q9BZE1 423 aaKnown RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 SLC23A1Q9UHI7 598 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 TRBV6-6A0A0A6YYG2 114 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 SIRPB1O00241 398 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 SH2D1BO14796 132 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 ATXN7O15265 892 aaPredicted RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 DUS4LO95620 317 aaKnown RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 PGAM2P15259 253 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 PTAFRP25105 342 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 RBMXP38159 391 aaKnown RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 MZT1Q08AG7 82 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 SPIN3Q5JUX0 258 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 LIN54Q6MZP7 749 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 C9orf62Q8N4C0 152 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 NUP37Q8NFH4 326 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 CASTOR1Q8WTX7 329 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 WFIKKN1Q96NZ8 548 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 RIMS4Q9H426 269 aaPredicted RBP13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 OPN4Q9UHM6 478 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 ITPR1Q14643 2758 aa13.16□□□□□ -0.3
GTF3C5-204ENST00000372108 PTBP3O95758 552 aaKnown RBP13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 SCTP09683 121 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 PPP3CBP16298 524 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 FCGR2CP31995 323 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 CD200P41217 278 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 ECI1P42126 302 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 PAN3Q58A45 887 aaKnown RBP13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 C11orf88Q6PI97 169 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 GRPEL2Q8TAA5 225 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 PHB2Q99623 299 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 C1orf123Q9NWV4 160 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 CCL21O00585 134 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 ABCD4O14678 606 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 CEBPDP49716 269 aaPredicted RBP13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 BSPH1Q075Z2 132 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 SPRNQ5BIV9 151 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 ZNF880Q6PDB4 577 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 ACP7Q6ZNF0 438 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 SSX8Q7RTT4 187 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 KDF1Q8NAX2 398 aaPredicted RBP13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 ELMOD3Q96FG2 381 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 TMEM246Q9BRR3 403 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 FXYD6Q9H0Q3 95 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 TAAR3PQ9P1P4 343 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
GTF3C5-204ENST00000372108 PLSCR5A0PG75 271 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 TRDCB7Z8K6 153 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 SFT2D2O95562 160 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 HAND1O96004 215 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 RPS2P15880 293 aaKnown RBP13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 CLEC18BQ6UXF7 455 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 OR5M8Q8NGP6 311 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 PLPPR1Q8TBJ4 325 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 MRPL24Q96A35 216 aaKnown RBP13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 OR14J1Q9UGF5 321 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 C14orf166Q9Y224 244 aaKnown RBP13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 ATP23Q9Y6H3 246 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 NBEAQ8NFP9 2946 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 ADGRG4Q8IZF6 3080 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 PLCE1Q9P212 2302 aa13.14□□□□□ -0.31
GTF3C5-204ENST00000372108 hCG_1807616A0A1W2PRN6 198 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 SPRY3O43610 288 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 KNG1P01042 644 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 CTSDP07339 412 aaPredicted RBP13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 SFTPCP11686 197 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 HLA-GP17693 338 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 NFYAP23511 347 aaPredicted RBP13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 SNRPD2P62316 118 aaKnown RBP13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 HERPUD1Q15011 391 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 ZNF497Q6ZNH5 498 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 TREM2Q9NZC2 230 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 CHD3Q12873 2000 aaKnown RBP13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 IGKV1-6A0A0C4DH72 117 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 KIR2DS1A0A191URI9 304 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 DBX1A6NMT0 343 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 ZNF728P0DKX0 622 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 RCC1P18754 421 aaPredicted RBP13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 AADACP22760 399 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 LMO1P25800 156 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 MDH2P40926 338 aaKnown RBP13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 KIR2DS4P43632 304 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 ASCL1P50553 236 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 FXYD4P59646 89 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 SELENOVP59797 346 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 KIR2DS1Q14954 304 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 SLC9A3R2Q15599 337 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 SHEQ5VZ18 495 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 KCTD9Q7L273 389 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 LRRC29Q8WV35 223 aa13.13□□□□□ -0.31
GTF3C5-204ENST00000372108 TOMM40LQ969M1 308 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms