RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 GUCA2AQ02747 115 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 ZP4Q12836 540 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 OR10K2Q6IF99 312 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 PRSS54Q6PEW0 395 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 ZNF600Q6ZNG1 722 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 LRRC75AQ8NAA5 344 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 OR13C8Q8NGS7 320 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 DCUN1D4Q92564 292 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 SLC25A28Q96A46 364 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 MSI2Q96DH6 328 aaKnown RBP12.69□□□□□ -0.38
LMO4-201ENST00000370542 OR8B4Q96RC9 309 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 CMSS1Q9BQ75 279 aaKnown RBP12.69□□□□□ -0.38
LMO4-201ENST00000370542 RAB1BQ9H0U4 201 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 SYT4Q9H2B2 425 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 RHOFQ9HBH0 211 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 PARP11Q9NR21 331 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 DBX1A6NMT0 343 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 ZNF705EA8MWA4 302 aaPredicted RBP12.68□□□□□ -0.38
LMO4-201ENST00000370542 VSTM5A8MXK1 200 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 IFNA6P05013 189 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 ZNF16P17020 682 aaPredicted RBP12.68□□□□□ -0.38
LMO4-201ENST00000370542 RCC1P18754 421 aaPredicted RBP12.68□□□□□ -0.38
LMO4-201ENST00000370542 NPBWR1P48145 328 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 RAB5CP51148 216 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 DVL1P1P54792 670 aaPredicted RBP12.68□□□□□ -0.38
LMO4-201ENST00000370542 CD81P60033 236 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 ALG10Q5BKT4 473 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 IGSF11Q5DX21 431 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 DNLZQ5SXM8 178 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 AQP3Q92482 292 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 FAM46BQ96A09 425 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 C1orf159Q96HA4 380 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 MICU1Q9BPX6 476 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 EMC6Q9BV81 110 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 BPESC1Q9GZL8 116 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 TINAGL1Q9GZM7 467 aaPredicted RBP12.68□□□□□ -0.38
LMO4-201ENST00000370542 TMPRSS5Q9H3S3 457 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 MED29Q9NX70 200 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 GRHPRQ9UBQ7 328 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 ADAM18Q9Y3Q7 739 aa12.68□□□□□ -0.38
LMO4-201ENST00000370542 C5orf51A6NDU8 294 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 LINC00587B1AMM8 73 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 LILRA1O75019 489 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 HTR3BO95264 441 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 CD5P06127 495 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 FBP1P09467 338 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 IGFBP3P17936 291 aaPredicted RBP12.67□□□□□ -0.38
LMO4-201ENST00000370542 CDKN2AP42771 156 aaKnown RBP12.67□□□□□ -0.38
LMO4-201ENST00000370542 GLP1RP43220 463 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 EFNB2P52799 333 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 F2RL1P55085 397 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 ROM1Q03395 351 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 HABP2Q14520 560 aaPredicted RBP12.67□□□□□ -0.38
LMO4-201ENST00000370542 MSMPQ1L6U9 139 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 GFOD2Q3B7J2 385 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 SLC18B1Q6NT16 456 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 VHLLQ6RSH7 139 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 HIST2H3AQ71DI3 136 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 ZNF679Q8IYX0 411 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 OR4A4PQ8NGN8 299 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 OR6N2Q8NGY6 317 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 OR6X1Q8NH79 312 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 OTOSQ8NHW6 89 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 DVL3Q92997 716 aaPredicted RBP12.67□□□□□ -0.38
LMO4-201ENST00000370542 TMEM54Q969K7 222 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 RASD2Q96D21 266 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 OPA3Q9H6K4 179 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 NIT2Q9NQR4 276 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 ZNF230Q9UIE0 474 aaPredicted RBP12.67□□□□□ -0.38
LMO4-201ENST00000370542 VSIG4Q9Y279 399 aa12.67□□□□□ -0.38
LMO4-201ENST00000370542 HLA-HP01893 362 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 GAPDHP04406 335 aaKnown RBP12.66□□□□□ -0.38
LMO4-201ENST00000370542 DAOP14920 347 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 PGAM2P15259 253 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 GLRXP35754 106 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 KIR3DL2P43630 455 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 SULT1A2P50226 295 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 ARHGDIBP52566 201 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 CTXN1P60606 82 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 SNRPEP62304 92 aaKnown RBP12.66□□□□□ -0.38
LMO4-201ENST00000370542 PPP1R1AQ13522 171 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 ZNF74Q16587 644 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 SCGB2B2Q4G0G5 96 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 NAA40Q86UY6 237 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 ZCCHC24Q8N2G6 241 aaKnown RBP12.66□□□□□ -0.38
LMO4-201ENST00000370542 ARRDC1Q8N5I2 433 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 ZNF511Q8NB15 262 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 ZNRF4Q8WWF5 429 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 MRPL24Q96A35 216 aaKnown RBP12.66□□□□□ -0.38
LMO4-201ENST00000370542 FOXB1Q99853 325 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 SLC6A7Q99884 636 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 OCSTAMPQ9BR26 566 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 SOX7Q9BT81 388 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 SMDT1Q9H4I9 107 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 CYTL1Q9NRR1 136 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 FBLN5Q9UBX5 448 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 KCNS2Q9ULS6 477 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 TIMM10BQ9Y5J6 103 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 DMRT1Q9Y5R6 373 aa12.66□□□□□ -0.38
LMO4-201ENST00000370542 ZNF726A6NNF4 738 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms