RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 C1orf147Q96MC9 270 aaPredicted RBP11.34□□□□□ -0.59
SSR4-202ENST00000370085 ZNF714Q96N38 554 aa11.34□□□□□ -0.59
SSR4-202ENST00000370085 MS4A7Q9GZW8 240 aaPredicted RBP11.34□□□□□ -0.59
SSR4-202ENST00000370085 SIRPDQ9H106 197 aa11.34□□□□□ -0.59
SSR4-202ENST00000370085 NCOR1P1Q9H4R4 102 aa11.34□□□□□ -0.59
SSR4-202ENST00000370085 HEXA-AS1Q9H8Q6 139 aa11.34□□□□□ -0.59
SSR4-202ENST00000370085 UBE2J1Q9Y385 318 aaPredicted RBP11.34□□□□□ -0.59
SSR4-202ENST00000370085 NF1P21359 2839 aa11.34□□□□□ -0.59
SSR4-202ENST00000370085 DSCAML1Q8TD84 2053 aa11.34□□□□□ -0.59
SSR4-202ENST00000370085 JMJD1CQ15652 2540 aa11.34□□□□□ -0.59
SSR4-202ENST00000370085 TRAV24A0A0B4J272 114 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 TRAV40A0A0B4J280 105 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 ODAMA1E959 279 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 TMEM14DPA8MWL7 114 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 CA11O75493 328 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 AVPP01185 164 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 MMP9P14780 707 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 EPHA1P21709 976 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 OR10A3P58181 314 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 ERVFRD-1P60508 538 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 PAX5Q02548 391 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 C2orf76Q3KRA6 126 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 RAB12Q6IQ22 244 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 C1orf229Q6ZS94 237 aaPredicted RBP11.33□□□□□ -0.6
SSR4-202ENST00000370085 SLC25A28Q96A46 364 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 GFI1Q99684 422 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 CENPOQ9BU64 300 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 FUNDC2Q9BWH2 189 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 UNKLQ9H9P5 680 aaKnown RBP11.33□□□□□ -0.6
SSR4-202ENST00000370085 LIN7BQ9HAP6 207 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 RAB9BQ9NP90 201 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 FBLN5Q9UBX5 448 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 SCOCQ9UIL1 159 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 RAB22AQ9UL26 194 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 PEX16Q9Y5Y5 336 aa11.33□□□□□ -0.6
SSR4-202ENST00000370085 MEIKINA0A087WXM9 373 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 TMEM30CPA0ZSE6 113 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 METTL21EPA6NDL7 271 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 PDCD6O75340 191 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 PRTN3P24158 256 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 CLDN12P56749 244 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 MXD1Q05195 221 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 SLC35E4Q6ICL7 350 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 SFXN4Q6P4A7 337 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 METAP1DQ6UB28 335 aaPredicted RBP11.32□□□□□ -0.6
SSR4-202ENST00000370085 RBMS3Q6XE24 437 aaKnown RBP11.32□□□□□ -0.6
SSR4-202ENST00000370085 OR56B1Q8NGI3 324 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 LHX4Q969G2 390 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 TM2D1Q9BX74 207 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 SIRT7Q9NRC8 400 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 ING3Q9NXR8 418 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 TAS2R3Q9NYW6 316 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 RCC2Q9P258 522 aaKnown RBP11.32□□□□□ -0.6
SSR4-202ENST00000370085 DAPK2Q9UIK4 370 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 KIAA2026Q5HYC2 2103 aa11.32□□□□□ -0.6
SSR4-202ENST00000370085 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 SHISA3A0PJX4 238 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 NOL3O60936 208 aaKnown RBP11.31□□□□□ -0.6
SSR4-202ENST00000370085 SCGNO76038 276 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 IL1AP01583 271 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 RAB6AP20340 208 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 BLVRBP30043 206 aaPredicted RBP11.31□□□□□ -0.6
SSR4-202ENST00000370085 GLIPR1P48060 266 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 SCAND1P57086 179 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 QRFPP83859 136 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 UNC119Q13432 240 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 ZNF273Q14593 569 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 NKAPLQ5M9Q1 402 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 OR52W1Q6IF63 320 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 OR10K2Q6IF99 312 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 TPRX1Q8N7U7 411 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 OR13D1Q8NGV5 346 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 ZNF418Q8TF45 676 aaPredicted RBP11.31□□□□□ -0.6
SSR4-202ENST00000370085 CORO2AQ92828 525 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 PTX4Q96A99 478 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 JMJD8Q96S16 334 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 TBX15Q96SF7 602 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 SUCNR1Q9BXA5 334 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 PLEKHJ1Q9NW61 149 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 SVEP1Q4LDE5 3571 aa11.31□□□□□ -0.6
SSR4-202ENST00000370085 IGHV1-69DA0A0B4J2H0 117 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 ZNF729A6NN14 1252 aaPredicted RBP11.3□□□□□ -0.6
SSR4-202ENST00000370085 C17orf98A8MV24 154 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 CLPXO76031 633 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 FSHBP01225 129 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 IGHV1-69P01742 117 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 CCL3L1P16619 93 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 GZMHP20718 246 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 GLP1RP43220 463 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 RPL5P46777 297 aaKnown RBP11.3□□□□□ -0.6
SSR4-202ENST00000370085 UBE2E1P51965 193 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 LSM3P62310 102 aaKnown RBP11.3□□□□□ -0.6
SSR4-202ENST00000370085 MRPS15P82914 257 aaKnown RBP11.3□□□□□ -0.6
SSR4-202ENST00000370085 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 ANKRD13BQ86YJ7 626 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 Q8N7P7 452 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 PHF21AQ96BD5 680 aa11.3□□□□□ -0.6
SSR4-202ENST00000370085 COQ2Q96H96 371 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms