RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 TRAV24A0A0B4J272 114 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 TMEM82A0PJX8 343 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 UBE2QL1A1L167 161 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 FAM157AC9JC47 383 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 TNFRSF13BO14836 293 aaPredicted RBP10.5□□□□□ -0.73
EFNA1-201ENST00000368406 GPR37O15354 613 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 SOCS1O15524 211 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 PSPNO60542 156 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 MSMBP08118 114 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 HOXB4P17483 251 aaPredicted RBP10.5□□□□□ -0.73
EFNA1-201ENST00000368406 DVL1P1P54792 670 aaPredicted RBP10.5□□□□□ -0.73
EFNA1-201ENST00000368406 DYNC1I2Q13409 638 aaKnown RBP10.5□□□□□ -0.73
EFNA1-201ENST00000368406 KRBOX4Q5JUW0 171 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 FOXB2Q5VYV0 432 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 Q6ZTK2 550 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 BTN2A1Q7KYR7 527 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 TRAPPC6BQ86SZ2 158 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 FGFRL1Q8N441 504 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 OR4S1Q8NGB4 309 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 OR4M1Q8NGD0 313 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 OR10R2Q8NGX6 335 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 RAB3CQ96E17 227 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 S100A16Q96FQ6 103 aaKnown RBP10.5□□□□□ -0.73
EFNA1-201ENST00000368406 POM121Q96HA1 1249 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 CHMP1AQ9HD42 196 aaPredicted RBP10.5□□□□□ -0.73
EFNA1-201ENST00000368406 DIABLOQ9NR28 239 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 ETAA1Q9NY74 926 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 ZNF581Q9P0T4 197 aa10.5□□□□□ -0.73
EFNA1-201ENST00000368406 TRAV20A0A0B4J274 112 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 HPGDSO60760 199 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 ZNF737O75373 536 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 ECDO95905 644 aaPredicted RBP10.49□□□□□ -0.73
EFNA1-201ENST00000368406 LMO1P25800 156 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 CHATP28329 748 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 TALDO1P37837 337 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 KCNJ3P48549 501 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 RPL31P62899 125 aaKnown RBP10.49□□□□□ -0.73
EFNA1-201ENST00000368406 BTNL3Q6UXE8 466 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 ZNF841Q6ZN19 808 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 C17orf107Q6ZR85 190 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 C6orf201Q7Z4U5 140 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 GLCCI1Q86VQ1 547 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 RAB40AQ8WXH6 277 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 SLC25A38Q96DW6 304 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 RCC2Q9P258 522 aaKnown RBP10.49□□□□□ -0.73
EFNA1-201ENST00000368406 ONECUT1Q9UBC0 465 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 LPAR3Q9UBY5 353 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 CDC42EP3Q9UKI2 254 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 NAV3Q8IVL0 2385 aa10.49□□□□□ -0.73
EFNA1-201ENST00000368406 TRBV23-1A0A0A0MS06 115 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 A0A1W2PPH5 198 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 TMEM30CPA0ZSE6 113 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 A6NHS1 94 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 A8MXK9 166 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 ENSAO43768 121 aaKnown RBP10.48□□□□□ -0.73
EFNA1-201ENST00000368406 P2RX3P56373 397 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 AESQ08117 197 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 ARFRP1Q13795 201 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 ARL6IP1Q15041 203 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 MOGAT2Q3SYC2 334 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 TMEM69Q5SWH9 247 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 CMTM4Q8IZR5 234 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 TPRX1Q8N7U7 411 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 SETD6Q8TBK2 473 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 DYRK2Q92630 601 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 TMEM186Q96B77 213 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 ARHGAP5-AS1Q96IT6 56 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 PECRQ9BY49 303 aa10.48□□□□□ -0.73
EFNA1-201ENST00000368406 TRAV18A0A075B6X5 111 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 MEIKINA0A087WXM9 373 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 TRGV10A0A0A0MS01 117 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 PPIAL4CA0A0B4J2A2 164 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 hADV38S2A0JD32 116 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 MEX3AA1L020 520 aaKnown RBP10.47□□□□□ -0.73
EFNA1-201ENST00000368406 KIAA1324LA8MWY0 1029 aaPredicted RBP10.47□□□□□ -0.73
EFNA1-201ENST00000368406 APOA1P02647 267 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 CSN2P05814 226 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 GLAP06280 429 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 EIF4EP06730 217 aaKnown RBP10.47□□□□□ -0.73
EFNA1-201ENST00000368406 CD3GP09693 182 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 HIST1H1DP16402 221 aaKnown RBP10.47□□□□□ -0.73
EFNA1-201ENST00000368406 GNB3P16520 340 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 CDK2P24941 298 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 ZFP36P26651 326 aaKnown RBP10.47□□□□□ -0.73
EFNA1-201ENST00000368406 S100A5P33763 92 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 MNDAP41218 407 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 GLP1RP43220 463 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 CHRFAM7AQ494W8 412 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 DCAF12L2Q5VW00 463 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 SIGIRRQ6IA17 410 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 IZUMO1Q8IYV9 350 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 FAM89BQ8N5H3 189 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 DTX3Q8N9I9 347 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 CMTM3Q96MX0 182 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 SULT4A1Q9BR01 284 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 NUDT16L1Q9BRJ7 211 aaKnown RBP10.47□□□□□ -0.73
EFNA1-201ENST00000368406 DCTN5Q9BTE1 182 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 FAAP24Q9BTP7 215 aa10.47□□□□□ -0.73
EFNA1-201ENST00000368406 SLIRPQ9GZT3 109 aaKnown RBP10.47□□□□□ -0.73
EFNA1-201ENST00000368406 SHARPINQ9H0F6 387 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms