RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 OR5D13Q8NGL4 314 aa12.26□□□□□ -0.45
CD48-201ENST00000368045 C14orf79Q96F83 325 aa12.26□□□□□ -0.45
CD48-201ENST00000368045 PARP12Q9H0J9 701 aaKnown RBP12.26□□□□□ -0.45
CD48-201ENST00000368045 SH3BGRL3Q9H299 93 aa12.26□□□□□ -0.45
CD48-201ENST00000368045 RPS10P5Q9NQ39 176 aa12.26□□□□□ -0.45
CD48-201ENST00000368045 ABI3Q9P2A4 366 aa12.26□□□□□ -0.45
CD48-201ENST00000368045 ATP23Q9Y6H3 246 aa12.26□□□□□ -0.45
CD48-201ENST00000368045 IGSF23A1L1A6 192 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 C7orf77A4D0Y5 90 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 C5orf49A4QMS7 147 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 SLC22A20A6NK97 555 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 C1orf196B1AJZ1 125 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 ZNF732B4DXR9 585 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 H0Y980 276 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 VDAC1P21796 283 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 S100GP29377 79 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 RPL35P42766 123 aaKnown RBP12.25□□□□□ -0.45
CD48-201ENST00000368045 GPM6AP51674 278 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 CLDN18P56856 261 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 VAMP2P63027 116 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 AWAT1Q58HT5 328 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 NMSQ5H8A3 153 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 CMTM1Q8IZ96 169 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 HIST1H2BAQ96A08 127 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 THOC3Q96J01 351 aaKnown RBP12.25□□□□□ -0.45
CD48-201ENST00000368045 CLCC1Q96S66 551 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 FGF23Q9GZV9 251 aaPredicted RBP12.25□□□□□ -0.45
CD48-201ENST00000368045 KCNJ16Q9NPI9 418 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 FAM24AA6NFZ4 105 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 NEURL1O76050 574 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 IGHV3-9P01782 118 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 WNT2P09544 360 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 ZNF883P0CG24 379 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 RAB1AP62820 205 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 ID3Q02535 119 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 HABP2Q14520 560 aaPredicted RBP12.25□□□□□ -0.45
CD48-201ENST00000368045 ABHD17BQ5VST6 288 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 TMEM182Q6ZP80 229 aaPredicted RBP12.25□□□□□ -0.45
CD48-201ENST00000368045 ZNF818PQ6ZRF7 136 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 GAPTQ8N292 157 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 OR1J1Q8NGS3 322 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 FAM213BQ8TBF2 198 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 SFT2D1Q8WV19 159 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 GNPNAT1Q96EK6 184 aaPredicted RBP12.25□□□□□ -0.45
CD48-201ENST00000368045 SPRY4Q9C004 299 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 ESRP2Q9H6T0 727 aaKnown RBP12.25□□□□□ -0.45
CD48-201ENST00000368045 PRDM6Q9NQX0 595 aa12.25□□□□□ -0.45
CD48-201ENST00000368045 RTTNQ86VV8 2226 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 OR5B21A6NL26 309 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 ADAM20O43506 726 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 HLA-HP01893 362 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 SCTP09683 121 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 SLC25A6P12236 298 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 ZNF44P15621 663 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 FHITP49789 147 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 POLR2GP62487 172 aaKnown RBP eCLIP12.24□□□□□ -0.45
CD48-201ENST00000368045 PLP2Q04941 152 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 HERPUD1Q15011 391 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 OR8G1Q15617 311 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 SPINK14Q6IE38 97 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 TUSC5Q8IXB3 177 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 ZNF561Q8N587 486 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 TMEM252Q8N6L7 170 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 LILRB1Q8NHL6 650 aaPredicted RBP12.24□□□□□ -0.45
CD48-201ENST00000368045 APH1AQ96BI3 265 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 POM121L2Q96KW2 1035 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 HIPK2Q9H2X6 1198 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 UNKLQ9H9P5 680 aaKnown RBP12.24□□□□□ -0.45
CD48-201ENST00000368045 MTCH1Q9NZJ7 389 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 MPC1Q9Y5U8 109 aa12.24□□□□□ -0.45
CD48-201ENST00000368045 LRP5LA4QPB2 252 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 SLC34A2O95436 690 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 CEACAM1P13688 526 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 CCNOP22674 350 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 ATP6V0CP27449 155 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 S100A12P80511 92 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 CLINT1Q14677 625 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 RNPS1Q15287 305 aaKnown RBP12.23□□□□□ -0.45
CD48-201ENST00000368045 DPPA3Q6W0C5 159 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 ZNF573Q86YE8 665 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 OR2G3Q8NGZ4 309 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 NEK7Q8TDX7 302 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 OR5P3Q8WZ94 311 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 C12orf57Q99622 126 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 IFT22Q9H7X7 185 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 CALHM2Q9HA72 323 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 LHX6Q9UPM6 363 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 SDK2Q58EX2 2172 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 A0A096LPE4 126 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 IGKV1D-13A0A0B4J2D9 117 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 A0A1W2PPZ6 126 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 ANKRD30BLA7E2S9 258 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 CD300LBA8K4G0 201 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 M0R036 132 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 SSSCA1O60232 199 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 C1QL1O75973 258 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 SNRNP70P08621 437 aaKnown RBP12.23□□□□□ -0.45
CD48-201ENST00000368045 IGKV1-13P0DP09 117 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 SRYQ05066 204 aa12.23□□□□□ -0.45
CD48-201ENST00000368045 IL24Q13007 206 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms