RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ABHD17BQ5VST6 288 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 DPPA3Q6W0C5 159 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 MRGPRGQ86SM5 289 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 RTN4RL2Q86UN3 420 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 APCDD1LQ8NCL9 501 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 OR13D1Q8NGV5 346 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 HPSE2Q8WWQ2 592 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 TMEM54Q969K7 222 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 MRPL24Q96A35 216 aaKnown RBP9.95□□□□□ -0.82
USF1-201ENST00000368019 INTS12Q96CB8 462 aaKnown RBP9.95□□□□□ -0.82
USF1-201ENST00000368019 DNAJA3Q96EY1 480 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 MARS2Q96GW9 593 aaKnown RBP9.95□□□□□ -0.82
USF1-201ENST00000368019 NAA11Q9BSU3 229 aaPredicted RBP9.95□□□□□ -0.82
USF1-201ENST00000368019 EMC6Q9BV81 110 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 NELFAQ9H3P2 528 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 C11orf1Q9H5F2 150 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 SPACA1Q9HBV2 294 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 NIT2Q9NQR4 276 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 IL36GQ9NZH8 169 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 ZNF391Q9UJN7 358 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 LSM5Q9Y4Y9 91 aaKnown RBP9.95□□□□□ -0.82
USF1-201ENST00000368019 DMRT1Q9Y5R6 373 aa9.95□□□□□ -0.82
USF1-201ENST00000368019 A0A087WZY1 265 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 A0A1W2PP11 408 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 EFNA2O43921 213 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 PITX3O75364 302 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 KNG1P01042 644 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 MBPP02686 304 aaPredicted RBP9.94□□□□□ -0.82
USF1-201ENST00000368019 SNRNP70P08621 437 aaKnown RBP9.94□□□□□ -0.82
USF1-201ENST00000368019 OR8U8P0C7N1 319 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 ZNF728P0DKX0 622 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 PTGDSP41222 190 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 ADORA2A-AS1P86434 159 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 PMP22Q01453 160 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 CNN3Q15417 329 aaKnown RBP9.94□□□□□ -0.82
USF1-201ENST00000368019 SRSF7Q16629 238 aaKnown RBP eCLIP9.94□□□□□ -0.82
USF1-201ENST00000368019 HIKESHIQ53FT3 197 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 HEPN1Q6WQI6 88 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 LANCL3Q6ZV70 420 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 RNF144BQ7Z419 303 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 CPEB2Q7Z5Q1 589 aaKnown RBP9.94□□□□□ -0.82
USF1-201ENST00000368019 ANKRD37Q7Z713 158 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 FADS6Q8N9I5 356 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 MDS2Q8NDY4 140 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 GNRHR2Q96P88 292 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 SPACA5Q96QH8 159 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 SPIN2AQ99865 258 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 SPIN2BQ9BPZ2 258 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 METTL9Q9H1A3 318 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 OPA3Q9H6K4 179 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 SIRT7Q9NRC8 400 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 KIAA1456Q9P272 454 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 VDAC3Q9Y277 283 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 ZNF835Q9Y2P0 537 aa9.94□□□□□ -0.82
USF1-201ENST00000368019 IGHV3-20A0A0C4DH32 117 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 A0A1W2PPH5 198 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 LINC01387J3KSC0 135 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 M0R036 132 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 RER1O15258 196 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 PPIHO43447 177 aaKnown RBP9.93□□□□□ -0.82
USF1-201ENST00000368019 VAMP5O95183 116 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 QDPRP09417 244 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 OR5H8P0DN80 308 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 HOXA5P20719 270 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 SERPINA2P20848 420 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 GUCA1AP43080 201 aaPredicted RBP9.93□□□□□ -0.82
USF1-201ENST00000368019 PIGPP57054 158 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 FBXW4P57775 412 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 RAB2AP61019 212 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 RSU1Q15404 277 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 C3AR1Q16581 482 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 ABCA11PQ4W5N1 156 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 ZNF766Q5HY98 468 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 FAM209BQ5JX69 171 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 ACER2Q5QJU3 275 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 Q6ZS49 121 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 SLC16A13Q7RTY0 426 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 ZNF100Q8IYN0 542 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 ZNF295-AS1Q8N0V1 137 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 ZNF565Q8N9K5 539 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 OR2M3Q8NG83 312 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 OR4D5Q8NGN0 318 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 SLC22A8Q8TCC7 542 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 THAP3Q8WTV1 239 aaPredicted RBP9.93□□□□□ -0.82
USF1-201ENST00000368019 ERGIC1Q969X5 290 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 MOB3AQ96BX8 217 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 MSI2Q96DH6 328 aaKnown RBP9.93□□□□□ -0.82
USF1-201ENST00000368019 LYZL4Q96KX0 146 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 LURAP1Q96LR2 239 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 TECTBQ96PL2 329 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 SIGLEC12Q96PQ1 595 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 PLSCR2Q9NRY7 297 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 ZNF701Q9NV72 531 aaPredicted RBP9.93□□□□□ -0.82
USF1-201ENST00000368019 PLEKHJ1Q9NW61 149 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 PRR13Q9NZ81 148 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 TINAGQ9UJW2 476 aa9.93□□□□□ -0.82
USF1-201ENST00000368019 MCTS1Q9ULC4 181 aaKnown RBP9.93□□□□□ -0.82
USF1-201ENST00000368019 IGKV1D-8A0A087WSZ0 117 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 A6NLC8 198 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms