RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CGB3P0DN86 165 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 CGB7P0DN87 165 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 PRKACAP17612 351 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 BCL3P20749 454 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 SPIN3Q5JUX0 258 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 TMEM104Q8NE00 496 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 OR51V1Q9H2C8 321 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 PPIL3Q9H2H8 161 aaKnown RBP11.18□□□□□ -0.62
VAMP4-202ENST00000367740 TMBIM4Q9HC24 238 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 ING3Q9NXR8 418 aa11.18□□□□□ -0.62
VAMP4-202ENST00000367740 MRPS28Q9Y2Q9 187 aaKnown RBP11.18□□□□□ -0.62
VAMP4-202ENST00000367740 A0A1B0GTI1 187 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 FAM90A10PA6NDY2 464 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 CSN2P05814 226 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 HCCSP53701 268 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 F2RL1P55085 397 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 SF3A3Q12874 501 aaKnown RBP eCLIP11.17□□□□□ -0.62
VAMP4-202ENST00000367740 UBE2V2Q15819 145 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 KRBOX4Q5JUW0 171 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 Q6ZSR3 168 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 GTSCR1Q86UQ5 136 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 OR10X1Q8NGY0 326 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 KCTD14Q9BQ13 255 aaPredicted RBP11.17□□□□□ -0.62
VAMP4-202ENST00000367740 ELOVL1Q9BW60 279 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 EXOSC4Q9NPD3 245 aaKnown RBP11.17□□□□□ -0.62
VAMP4-202ENST00000367740 FAM53CQ9NYF3 392 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 CALYQ9NYX4 217 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 ZNF107Q9UII5 783 aaPredicted RBP11.17□□□□□ -0.62
VAMP4-202ENST00000367740 LAMP5Q9UJQ1 280 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 DNAH11Q96DT5 4516 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 HERC1Q15751 4861 aa11.17□□□□□ -0.62
VAMP4-202ENST00000367740 A0A1W2PPE3 182 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 DHRS7CA6NNS2 312 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 ATP6V0E1O15342 81 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 MOSP00540 346 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 GASTP01350 101 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 ATXN7L3Q14CW9 347 aaPredicted RBP11.16□□□□□ -0.62
VAMP4-202ENST00000367740 C8orf82Q6P1X6 216 aaPredicted RBP11.16□□□□□ -0.62
VAMP4-202ENST00000367740 DEGS2Q6QHC5 323 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 OR8H1Q8NGG4 311 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 OSBPL10Q9BXB5 764 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 SAR1AQ9NR31 198 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 OR6C3Q9NZP0 311 aa11.16□□□□□ -0.62
VAMP4-202ENST00000367740 ZNF736B4DX44 427 aaPredicted RBP11.15□□□□□ -0.62
VAMP4-202ENST00000367740 SRSF10O75494 262 aaKnown RBP11.15□□□□□ -0.62
VAMP4-202ENST00000367740 GAPDHP04406 335 aaKnown RBP11.15□□□□□ -0.62
VAMP4-202ENST00000367740 SLC2A2P11168 524 aaPredicted RBP11.15□□□□□ -0.62
VAMP4-202ENST00000367740 GLP1RP43220 463 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 BNIP1Q12981 228 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 GALEQ14376 348 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 LTC4SQ16873 150 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 ZNF829Q3KNS6 432 aaPredicted RBP11.15□□□□□ -0.62
VAMP4-202ENST00000367740 GLYATQ6IB77 296 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 CEMP1Q6PRD7 247 aaPredicted RBP11.15□□□□□ -0.62
VAMP4-202ENST00000367740 IQCF1Q8N6M8 205 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 DYDC1Q8WWB3 177 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 TMEM106AQ96A25 262 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 SIKE1Q9BRV8 207 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 MROQ9BYG7 248 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 TTTY10Q9BZA0 68 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 HMG20AQ9NP66 347 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 IL1RAPQ9NPH3 570 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 MRGBPQ9NV56 204 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 IDI2-AS1Q9NZ38 188 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 GTF2A1LQ9UNN4 478 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 GSTK1Q9Y2Q3 226 aa11.15□□□□□ -0.62
VAMP4-202ENST00000367740 TRAV41A0A0B4J266 112 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 SHISA3A0PJX4 238 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 SH2D1BO14796 132 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 RGS11O94810 467 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 IL1AP01583 271 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 CD1BP29016 333 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 FUT6P51993 359 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 LGALS9CQ6DKI2 356 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 MINDY2Q8NBR6 621 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 OR13A1Q8NGR1 328 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 CASTOR1Q8WTX7 329 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 PYURFQ96I23 114 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 LRGUKQ96M69 825 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 LINC00574Q9H8X3 128 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 PARP11Q9NR21 331 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 INTS9Q9NV88 658 aaKnown RBP11.14□□□□□ -0.63
VAMP4-202ENST00000367740 COPS3Q9UNS2 423 aa11.14□□□□□ -0.63
VAMP4-202ENST00000367740 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 PKD1P98161 4303 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 H0Y980 276 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 SOX15O60248 233 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 EDF1O60869 148 aaKnown RBP11.13□□□□□ -0.63
VAMP4-202ENST00000367740 HSPB1P04792 205 aaKnown RBP11.13□□□□□ -0.63
VAMP4-202ENST00000367740 FABP3P05413 133 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 RIDAP52758 137 aaKnown RBP11.13□□□□□ -0.63
VAMP4-202ENST00000367740 EWSR1Q01844 656 aaKnown RBP eCLIP11.13□□□□□ -0.63
VAMP4-202ENST00000367740 ROM1Q03395 351 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 BCL2L15Q5TBC7 163 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 ZNF679Q8IYX0 411 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 ELMOD2Q8IZ81 293 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 AQP11Q8NBQ7 271 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 RTN4IP1Q8WWV3 396 aaPredicted RBP11.13□□□□□ -0.63
VAMP4-202ENST00000367740 BORCS8Q96FH0 119 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms