RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 C7orf77A4D0Y5 90 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 EPPINO95925 133 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 HBZP02008 142 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 OLIG3Q7RTU3 272 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 TNXAQ16473 311 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF880Q6PDB4 577 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.26□□□□□ -1.09
VPS13A-203ENST00000360280 SYT11Q9BT88 431 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 PPIL1Q9Y3C6 166 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 ANKRD20A5PA0PJZ0 165 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 CRHP06850 196 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 EMDP50402 254 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 FAM53AQ6NSI3 398 aaPredicted RBP8.26□□□□□ -1.09
VPS13A-203ENST00000360280 FLYWCH2Q96CP2 140 aaKnown RBP8.26□□□□□ -1.09
VPS13A-203ENST00000360280 SERTM1A2A2V5 107 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 CAPZBP47756 277 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 SPINK9Q5DT21 86 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 SLC25A37Q9NYZ2 338 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 C1RLQ9NZP8 487 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 ZMIZ1Q9ULJ6 1067 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 DEFB108AA8MXU0 73 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 HTN1P15515 57 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 PLPPR5Q32ZL2 321 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 DEGS2Q6QHC5 323 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 C16orf82Q7Z2V1 217 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 Q8WTZ3 238 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 DDTP30046 118 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 MPV17LQ2QL34 196 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 NUDT10Q8NFP7 164 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 NUDT11Q96G61 164 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 NEU3Q9UQ49 428 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 BCORQ6W2J9 1755 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 FAM109BQ6ICB4 259 aaPredicted RBP8.26□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF707Q96C28 371 aaPredicted RBP8.26□□□□□ -1.09
VPS13A-203ENST00000360280 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.26□□□□□ -1.09
VPS13A-203ENST00000360280 B4E171 279 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 MAS1LP35410 378 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 CRYBB2P43320 205 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 RAB1BQ9H0U4 201 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 CTXND1A0A1B0GTU2 59 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 LOC389332A0A1B0GUA5 103 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 TMEM202A6NGA9 273 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 LEPROTL1O95214 131 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 IL4P05112 153 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 OR8B3Q8NGG8 313 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 ABHD14AQ9BUJ0 271 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 SLC52A3Q9NQ40 469 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 GFYI3L273 518 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 NPBWR2P48146 333 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 CEACAM16Q2WEN9 425 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 IGHV3-20A0A0C4DH32 117 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 LGALS3P17931 250 aaKnown RBP8.26□□□□□ -1.09
VPS13A-203ENST00000360280 PMELP40967 661 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 CDX1P47902 265 aaPredicted RBP8.26□□□□□ -1.09
VPS13A-203ENST00000360280 HYAL1Q12794 435 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 ALKBH6Q3KRA9 238 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 SLC25A34Q6PIV7 304 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 WSB2Q9NYS7 404 aaPredicted RBP8.26□□□□□ -1.09
VPS13A-203ENST00000360280 PRNDQ9UKY0 176 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 TMEM207Q6UWW9 146 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 CLEC1BQ9P126 229 aa8.26□□□□□ -1.09
VPS13A-203ENST00000360280 CXCL13O43927 109 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 OR4A8P0C604 315 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 ASCL3Q9NQ33 180 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 ZBTB42B2RXF5 422 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 TRDCB7Z8K6 153 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 PITX3O75364 302 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 C10orf35Q96D05 121 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 TXNDC17Q9BRA2 123 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 HERPUD1Q15011 391 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 TMEM108Q6UXF1 575 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 FADS6Q8N9I5 356 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 OR10AG1Q8NH19 301 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 PEF1Q9UBV8 284 aaKnown RBP8.25□□□□□ -1.09
VPS13A-203ENST00000360280 PPM1DO15297 605 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 CA6P23280 308 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 LINC00596Q86U02 117 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 OR13H1Q8NG92 308 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 FBXO17Q96EF6 278 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 SCN5AQ14524 2016 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 IGLV3-10A0A075B6K4 115 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 PPIHO43447 177 aaKnown RBP8.25□□□□□ -1.09
VPS13A-203ENST00000360280 ZGLP1P0C6A0 271 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF98A6NK75 572 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF273Q14593 569 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 LYPD8Q6UX82 237 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 CXorf67Q86X51 503 aaPredicted RBP8.25□□□□□ -1.09
VPS13A-203ENST00000360280 MRPL16Q9NX20 251 aaKnown RBP8.25□□□□□ -1.09
VPS13A-203ENST00000360280 MKRN2OSH3BPM6 223 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 OR3A4PP47883 348 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 ABHD3Q8WU67 409 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 SARGQ9BW04 601 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 A0A1B0GV90 55 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 TRILQ7L0X0 811 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 ZFPL1O95159 310 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 CYB5R3P00387 301 aaPredicted RBP8.25□□□□□ -1.09
VPS13A-203ENST00000360280 HINT1P49773 126 aaPredicted RBP8.25□□□□□ -1.09
VPS13A-203ENST00000360280 PLXNA1Q9UIW2 1896 aa8.25□□□□□ -1.09
VPS13A-203ENST00000360280 TMEM179BQ7Z7N9 219 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms