RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PLPPR1Q8TBJ4 325 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 NEK7Q8TDX7 302 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 DYRK2Q92630 601 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 MSI2Q96DH6 328 aaKnown RBP12.3□□□□□ -0.44
CCNE1-202ENST00000357943 COQ2Q96H96 371 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 SULT4A1Q9BR01 284 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 FAAP24Q9BTP7 215 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 ABCG5Q9H222 651 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 ZMAT3Q9HA38 289 aaKnown RBP12.3□□□□□ -0.44
CCNE1-202ENST00000357943 AKIP1Q9NQ31 210 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 PLEKHJ1Q9NW61 149 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 ZFHX3Q15911 3703 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 MEX3AA1L020 520 aaKnown RBP12.29□□□□□ -0.44
CCNE1-202ENST00000357943 UBE2QL1A1L167 161 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 B4DSR2 109 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 MCRIP1C9JLW8 97 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 GPR37O15354 613 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 RGS5O15539 181 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 FOXH1O75593 365 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 OLFML2AQ68BL7 652 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 DTX3Q8N9I9 347 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 RAB3CQ96E17 227 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 DCTN5Q9BTE1 182 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 MMP26Q9NRE1 261 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 KCNK7Q9Y2U2 307 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 ACANP16112 2415 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 ARHGAP32A7KAX9 2087 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 LOC105371242A0A075B767 164 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 MSMBP08118 114 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 GNB3P16520 340 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 ELK1P19419 428 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 CDK2P24941 298 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 S100A5P33763 92 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 GLIPR1P48060 266 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 PAX2Q02962 417 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 RBM39Q14498 530 aaKnown RBP12.29□□□□□ -0.44
CCNE1-202ENST00000357943 KRBOX4Q5JUW0 171 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 LAX1Q8IWV1 398 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 LINC01356Q8N9X3 169 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 S100ZQ8WXG8 99 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 RAB40AQ8WXH6 277 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 DACT3Q96B18 629 aaPredicted RBP12.29□□□□□ -0.44
CCNE1-202ENST00000357943 C18orf12Q96KH6 178 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 PECRQ9BY49 303 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 MIXL1Q9H2W2 232 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 C19orf12Q9NSK7 152 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 RPUSD1Q9UJJ7 312 aaKnown RBP12.29□□□□□ -0.44
CCNE1-202ENST00000357943 ELF5Q9UKW6 265 aaPredicted RBP12.29□□□□□ -0.44
CCNE1-202ENST00000357943 HSF4Q9ULV5 492 aa12.29□□□□□ -0.44
CCNE1-202ENST00000357943 POLR3KQ9Y2Y1 108 aaPredicted RBP12.29□□□□□ -0.44
CCNE1-202ENST00000357943 H3BUI4 141 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 APOA1P02647 267 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 GLAP06280 429 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 HIST1H1DP16402 221 aaKnown RBP12.28□□□□□ -0.44
CCNE1-202ENST00000357943 KCNJ3P48549 501 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 GZMKP49863 264 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 RPL31P62899 125 aaKnown RBP12.28□□□□□ -0.44
CCNE1-202ENST00000357943 RSBN1Q5VWQ0 802 aaPredicted RBP12.28□□□□□ -0.44
CCNE1-202ENST00000357943 CD276Q5ZPR3 534 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 IZUMO1Q8IYV9 350 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 MFSD4AQ8N468 514 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 S100A16Q96FQ6 103 aaKnown RBP12.28□□□□□ -0.44
CCNE1-202ENST00000357943 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 TMUB1Q9BVT8 246 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 MAST4O15021 2626 aa12.28□□□□□ -0.44
CCNE1-202ENST00000357943 YLPM1P49750 1951 aaKnown RBP12.27□□□□□ -0.44
CCNE1-202ENST00000357943 HIVEP1P15822 2718 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 MFNGO00587 321 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 SCGNO76038 276 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 ECDO95905 644 aaPredicted RBP12.27□□□□□ -0.44
CCNE1-202ENST00000357943 TGFAP01135 160 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 ERP29P30040 261 aaKnown RBP12.27□□□□□ -0.44
CCNE1-202ENST00000357943 P2RX3P56373 397 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 MADCAM1Q13477 382 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 ZNF846Q147U1 533 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 ZNF497Q6ZNH5 498 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 TCF23Q7RTU1 214 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 LY6G5BQ8NDX9 201 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 FAM210AQ96ND0 272 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 WDR12Q9GZL7 423 aaKnown RBP12.27□□□□□ -0.44
CCNE1-202ENST00000357943 DIABLOQ9NR28 239 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 AK3Q9UIJ7 227 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 KIF25Q9UIL4 384 aa12.27□□□□□ -0.44
CCNE1-202ENST00000357943 DOCK11Q5JSL3 2073 aa12.27□□□□□ -0.45
CCNE1-202ENST00000357943 TRAV18A0A075B6X5 111 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 TRBV23-1A0A0A0MS06 115 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 A0A0A6YYH2 397 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 PPIAL4CA0A0B4J2A2 164 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 IGHV2-70DA0A0C4DH43 119 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 A6NJ64 397 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 FAM25AB3EWG3 89 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 FAM25CB3EWG5 89 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 FAM25GB3EWG6 89 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 XRCC3O43542 346 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 PPIAL4GP0DN37 164 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 CD99P14209 185 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 ZNF16P17020 682 aaPredicted RBP12.26□□□□□ -0.45
CCNE1-202ENST00000357943 PAX5Q02548 391 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 KRTAP1-1Q07627 177 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms