RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ST3GAL2Q16842 350 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 OR5A2Q8NGI9 324 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 RSG1Q9BU20 258 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 C4BP0C0L5 1744 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 RPL31P62899 125 aaKnown RBP6.43□□□□□ -1.38
VPS13A-202ENST00000357409 PPP1R1AQ13522 171 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 RNPS1Q15287 305 aaKnown RBP6.43□□□□□ -1.38
VPS13A-202ENST00000357409 SVBPQ8N300 66 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 IGKV1D-16P01601 117 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 BRS3P32247 399 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 BPIFB3P59826 476 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 SUMO1P63165 101 aaKnown RBP6.43□□□□□ -1.38
VPS13A-202ENST00000357409 CADM3Q8N126 398 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 OR8A1Q8NGG7 326 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 TERB2Q8NHR7 220 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 GPR137Q96N19 417 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 ZFPL1O95159 310 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 UQCRFS1P47985 274 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 CNN1P51911 297 aaKnown RBP6.43□□□□□ -1.38
VPS13A-202ENST00000357409 UNQ5815/PRO19632Q6UWF5 114 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 ATP5SQ99766 215 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 LNP1A1A4G5 178 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 PRDX2P32119 198 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 HOXA4Q00056 320 aaPredicted RBP6.42□□□□□ -1.38
VPS13A-202ENST00000357409 ABLIM2Q6H8Q1 611 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 SMPD2O60906 423 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 CD37P11049 281 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 GLULP15104 373 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 UCP2P55851 309 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 RHBDD2Q6NTF9 364 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 LYZL2Q7Z4W2 148 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 ZNRF1Q8ND25 227 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 FAM157CP0CG43 387 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 RPL13AP40429 203 aaKnown RBP6.42□□□□□ -1.38
VPS13A-202ENST00000357409 CMPK2Q5EBM0 449 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 DYNC2LI1Q8TCX1 351 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 DUSP15Q9H1R2 295 aaPredicted RBP6.42□□□□□ -1.38
VPS13A-202ENST00000357409 MS4A5Q9H3V2 200 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 GAR1Q9NY12 217 aaKnown RBP6.42□□□□□ -1.38
VPS13A-202ENST00000357409 NPBWR2P48146 333 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 OR8D4Q8NGM9 314 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 TMED3Q9Y3Q3 217 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 DHRS3O75911 302 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 PSG4Q00888 419 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 KIAA0040Q15053 153 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 PTP4A1Q93096 173 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 GP6Q9HCN6 339 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF737O75373 536 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 CTXN2P0C2S0 81 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 ACSM4P0C7M7 580 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 GALR1P47211 349 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF738Q8NE65 137 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 SMIM19Q96E16 107 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 UQCC1Q9NVA1 299 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 NPAP1Q9NZP6 1156 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 ANKRD12Q6UB98 2062 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 E5RGE8 158 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 FXYD7P58549 80 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 SLC51BQ86UW2 128 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 C9orf40Q8IXQ3 194 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 METTL26Q96S19 204 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 GPR35Q9HC97 309 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 OR5B21A6NL26 309 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 CEACAM3P40198 252 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 SRSF7Q16629 238 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS13A-202ENST00000357409 ABHD12Q8N2K0 398 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 FOXJ3Q9UPW0 622 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF256Q9Y2P7 627 aaPredicted RBP6.42□□□□□ -1.38
VPS13A-202ENST00000357409 KLK4Q9Y5K2 254 aa6.42□□□□□ -1.38
VPS13A-202ENST00000357409 A0A1W2PN81 502 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 C5orf52A6NGY3 159 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 RAB29O14966 203 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 IGHV4-34P06331 123 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 GCSHP23434 173 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 EFNB2P52799 333 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 IGSF11Q5DX21 431 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 EMC4Q5J8M3 183 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 CD276Q5ZPR3 534 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF429Q86V71 674 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 TMEM105Q8N8V8 129 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 ZDHHC22Q8N966 263 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 OR13C6PQ8NH95 151 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF502Q8TBZ5 544 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 STARD4Q96DR4 205 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 AMDHD2Q9Y303 409 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 XKRY2A2RUG3 117 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 LILRA5A6NI73 299 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 MELTFP08582 738 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 ACP1P24666 158 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 PAFAH1B2P68402 229 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 FUT7Q11130 342 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 ENDOGQ14249 297 aaKnown RBP6.41□□□□□ -1.38
VPS13A-202ENST00000357409 WFDC6Q9BQY6 131 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 NKX2-2O95096 273 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 CST4P01036 141 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 HRASP01112 189 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 EIF3IQ13347 325 aaKnown RBP6.41□□□□□ -1.38
VPS13A-202ENST00000357409 KCNMB1Q16558 191 aa6.41□□□□□ -1.38
VPS13A-202ENST00000357409 TBL2Q9Y4P3 447 aaKnown RBP6.41□□□□□ -1.38
VPS13A-202ENST00000357409 C9orf170A2RU37 121 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms