RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 USF2Q15853 346 aaPredicted RBP11.54□□□□□ -0.56
NCDN-201ENST00000356090 PYY3Q5JQD4 70 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 NABP1Q96AH0 204 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 MOB3AQ96BX8 217 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 TVP23CQ96ET8 276 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 GALNT14Q96FL9 552 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 RSG1Q9BU20 258 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 EGLN1Q9GZT9 426 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 FOXI3A8MTJ6 420 aaPredicted RBP11.54□□□□□ -0.56
NCDN-201ENST00000356090 RAB35Q15286 201 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 SSC4DQ8WTU2 575 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 TAAR9Q96RI9 348 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 GLRX2Q9NS18 164 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 GFOD1Q9NXC2 390 aa11.54□□□□□ -0.56
NCDN-201ENST00000356090 CEBPZOSA8MTT3 80 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 ZNF587BE7ETH6 402 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 CFIP05156 583 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 SSR4P51571 173 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 ERVFRD-1P60508 538 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 RPS16P62249 146 aaKnown RBP11.53□□□□□ -0.56
NCDN-201ENST00000356090 TLE4Q04727 773 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 ZNF880Q6PDB4 577 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 ZNF818PQ6ZRF7 136 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 WDR5BQ86VZ2 330 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 C18orf12Q96KH6 178 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 SNX22Q96L94 193 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 FOXB1Q99853 325 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 TINAGQ9UJW2 476 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 DOCK11Q5JSL3 2073 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 TRDCB7Z8K6 153 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 VAMP5O95183 116 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 IGHV2-5P01817 119 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 MMP9P14780 707 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 OTX2P32243 289 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 ALDH3B1P43353 468 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 PSG4Q00888 419 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 KCNMB1Q16558 191 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 Q3ZCU0 254 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 HEPN1Q6WQI6 88 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 RPS19BP1Q86WX3 136 aaKnown RBP11.53□□□□□ -0.56
NCDN-201ENST00000356090 KMT5CQ86Y97 462 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 FGFBP3Q8TAT2 258 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 PLK3Q9H4B4 646 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 PRRC2CQ9Y520 2896 aaKnown RBP11.53□□□□□ -0.56
NCDN-201ENST00000356090 RP1L1Q8IWN7 2480 aaPredicted RBP11.53□□□□□ -0.56
NCDN-201ENST00000356090 A0A1W2PQM1 296 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 SCAF4O95104 1147 aaKnown RBP11.53□□□□□ -0.56
NCDN-201ENST00000356090 BCL3P20749 454 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 S100GP29377 79 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 TESK1Q15569 626 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 HIST3H3Q16695 136 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 WIPI1Q5MNZ9 446 aaPredicted RBP11.53□□□□□ -0.56
NCDN-201ENST00000356090 VASH2Q86V25 355 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 ADPRHL1Q8NDY3 354 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 OR56B2PQ8NGI1 322 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 ZNF488Q96MN9 340 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 ZNF665Q9H7R5 613 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 TUBA4BQ9H853 241 aa11.53□□□□□ -0.56
NCDN-201ENST00000356090 WDFY3Q8IZQ1 3526 aa11.52□□□□□ -0.56
NCDN-201ENST00000356090 CXorf65A6NEN9 183 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 METTL15P1P0C7V9 234 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 FAM27BQ5VT28 67 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 WDR74Q6RFH5 385 aaPredicted RBP11.52□□□□□ -0.57
NCDN-201ENST00000356090 ZNF100Q8IYN0 542 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 MUCL1Q96DR8 90 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2AAQ96QV6 131 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 TMEM222Q9H0R3 208 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 SEBOXQ9HB31 216 aaPredicted RBP11.52□□□□□ -0.57
NCDN-201ENST00000356090 RBMXL2O75526 392 aaKnown RBP11.52□□□□□ -0.57
NCDN-201ENST00000356090 FUT6P51993 359 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 RBM11P57052 281 aaKnown RBP11.52□□□□□ -0.57
NCDN-201ENST00000356090 ADIRFQ15847 76 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 SLC25A53Q5H9E4 307 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 MRPL21Q7Z2W9 205 aaKnown RBP11.52□□□□□ -0.57
NCDN-201ENST00000356090 ABHD3Q8WU67 409 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 MEGF10Q96KG7 1140 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 HSF4Q9ULV5 492 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 GAB2Q9UQC2 676 aa11.52□□□□□ -0.57
NCDN-201ENST00000356090 IGKV1D-13A0A0B4J2D9 117 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 IGHV5-10-1A0A0J9YXX1 117 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 C9J4A7 227 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 PROB1E7EW31 1015 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 SRP19P09132 144 aaKnown RBP11.51□□□□□ -0.57
NCDN-201ENST00000356090 IGKV1-13P0DP09 117 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 CD200P41217 278 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 OR8G2PQ6IF36 304 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 OR1K1Q8NGR3 316 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 LYPD6BQ8NI32 183 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 HS3ST3B1Q9Y662 390 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 FRYLO94915 3013 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 ZNF705GA8MUZ8 300 aaPredicted RBP11.51□□□□□ -0.57
NCDN-201ENST00000356090 P04436 131 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 BTF3P20290 206 aaKnown RBP11.51□□□□□ -0.57
NCDN-201ENST00000356090 SUCLG1P53597 346 aaKnown RBP11.51□□□□□ -0.57
NCDN-201ENST00000356090 DSCR4P56555 118 aaPredicted RBP11.51□□□□□ -0.57
NCDN-201ENST00000356090 SRPXP78539 464 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 ZNF787Q6DD87 383 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 GNPNAT1Q96EK6 184 aaPredicted RBP11.51□□□□□ -0.57
NCDN-201ENST00000356090 FAM210BQ96KR6 192 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 KIAA1456Q9P272 454 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms