RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RGPD5Q99666 1765 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 PATE4P0C8F1 98 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 Q6ZS52 159 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 GAPTQ8N292 157 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 SNRNP40Q96DI7 357 aaKnown RBP13.13□□□□□ -0.31
LMX1B-201ENST00000355497 SLC25A33Q9BSK2 321 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 MRM2Q9UI43 246 aaKnown RBP13.13□□□□□ -0.31
LMX1B-201ENST00000355497 CXorf1O96002 111 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 SLC35E3Q7Z769 313 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 PRNDQ9UKY0 176 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 LEUTXA8MZ59 168 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 NAT1P18440 290 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 AMMECR1LQ6DCA0 310 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 FAM219AQ8IW50 185 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 SLC52A3Q9NQ40 469 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 C1RLQ9NZP8 487 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 SCN11AQ9UI33 1791 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 M0R296 226 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 TCF21O43680 179 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 IER3P46695 156 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 SLC23A3Q6PIS1 610 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 KCNMB2Q9Y691 235 aa13.13□□□□□ -0.31
LMX1B-201ENST00000355497 DHRS7CA6NNS2 312 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 HYAL3O43820 417 aaPredicted RBP13.12□□□□□ -0.31
LMX1B-201ENST00000355497 CTSVO60911 334 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 CRHP06850 196 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 CD226Q15762 336 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 ASCL5Q7RTU5 278 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 PTP4A1Q93096 173 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 C10orf35Q96D05 121 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 MRPL13Q9BYD1 178 aaKnown RBP13.12□□□□□ -0.31
LMX1B-201ENST00000355497 GEMIN2O14893 280 aaKnown RBP13.12□□□□□ -0.31
LMX1B-201ENST00000355497 PKIAP61925 76 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 MSRB3Q8IXL7 192 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 AMER3Q8N944 861 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 ZFP30Q9Y2G7 519 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 PAGE4O60829 102 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 DAOP14920 347 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 TMEM255AQ5JRV8 349 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 ZNF880Q6PDB4 577 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 NEU3Q9UQ49 428 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 CDX4O14627 284 aaPredicted RBP13.12□□□□□ -0.31
LMX1B-201ENST00000355497 SMAGPQ0VAQ4 97 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 DMKNQ6E0U4 476 aaPredicted RBP13.12□□□□□ -0.31
LMX1B-201ENST00000355497 ABHD1Q96SE0 405 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 PCMT1P22061 227 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 HMGA2P52926 109 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 EWSR1Q01844 656 aaKnown RBP eCLIP13.12□□□□□ -0.31
LMX1B-201ENST00000355497 CBLN2Q8IUK8 224 aa13.12□□□□□ -0.31
LMX1B-201ENST00000355497 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
LMX1B-201ENST00000355497 SNURFLB1AK76 121 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 CXCL10P02778 98 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 ID1P41134 155 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 METAP1P53582 386 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 IZUMO4Q1ZYL8 232 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 THSD4Q6ZMP0 1018 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 PRSS41Q7RTY9 318 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 MRGPRGQ86SM5 289 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 TRAF4Q9BUZ4 470 aaPredicted RBP13.11□□□□□ -0.31
LMX1B-201ENST00000355497 ZNF552Q9H707 407 aaPredicted RBP13.11□□□□□ -0.31
LMX1B-201ENST00000355497 IGHV1OR21-1A0A087WYE8 117 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 RNASE1P07998 156 aaKnown RBP13.11□□□□□ -0.31
LMX1B-201ENST00000355497 RTP5Q14D33 572 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 OR4A47Q6IF82 309 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 SLC25A42Q86VD7 318 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 GBGT1Q8N5D6 347 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 WDR34Q96EX3 536 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 FAM74A7A6NL05 159 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 H3BQ15 152 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 SOCS1O15524 211 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 STXBP6Q8NFX7 210 aa13.11□□□□□ -0.31
LMX1B-201ENST00000355497 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 SIAH2O43255 324 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 CA2P00918 260 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 VDAC1P21796 283 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 FAM219BQ5XKK7 198 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 OR8I2Q8N0Y5 310 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 TMEM38BQ9NVV0 291 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 CHD4Q14839 1912 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 CD82P27701 267 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 COL5A1-AS1Q5SY13 56 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 MOGAT3Q86VF5 341 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 LRRC75AQ8NAA5 344 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 CCL28Q9NRJ3 127 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 IGLV3-16A0A075B6K0 115 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 RAB29O14966 203 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 CD81P60033 236 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 DYNLRB2Q8TF09 96 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 TBX15Q96SF7 602 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 SF3B5Q9BWJ5 86 aaKnown RBP13.1□□□□□ -0.31
LMX1B-201ENST00000355497 TCFL5Q9UL49 500 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 H7C2G1 150 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 OGG1O15527 345 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 KIAA0040Q15053 153 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
LMX1B-201ENST00000355497 LINC01555Q8NAE3 123 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 OR4D9Q8NGE8 314 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms