RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 A0A0A6YYD5 115 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 FBLL1A6NHQ2 334 aaKnown RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 PDE6DO43924 150 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 NDUFB6O95139 128 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 CNTD2Q9H8S5 307 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 RAXQ9Y2V3 346 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 TMSB15BA0A087X1C1 80 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 NUDT3O95989 172 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 SPINK14Q6IE38 97 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 PCGF1Q9BSM1 259 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 IGKV3D-15A0A087WSY6 115 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 KCNAB3O43448 404 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 IGKV3-15P01624 115 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 SLC35E3Q7Z769 313 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 SSMEM1Q8WWF3 244 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 ADAT3Q96EY9 351 aaPredicted RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 P2RX4Q99571 388 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 TEX101Q9BY14 249 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 HEXA-AS1Q9H8Q6 139 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 TMEM38BQ9NVV0 291 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 PNRC1Q12796 327 aaPredicted RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 FAM109BQ6ICB4 259 aaPredicted RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 ZNF385DQ9H6B1 395 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 MPDU1O75352 247 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 SRSF10O75494 262 aaKnown RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 CA2P00918 260 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 MRPL54Q6P161 138 aaKnown RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 EAF1Q96JC9 268 aaPredicted RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 IGHV3OR16-12A0A075B7B8 117 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 CDRT15L2A8MXV6 281 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 MEOX2P50222 304 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 ANKRD37Q7Z713 158 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 LGALSLQ3ZCW2 172 aaPredicted RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 COL5A1-AS1Q5SY13 56 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 C1orf210Q8IVY1 113 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 APOBEC4Q8WW27 367 aaKnown RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 TRIP6Q15654 476 aaKnown RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 ZNF735P0CB33 412 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 SLC35B1P78383 322 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 C10orf113Q5VZT2 155 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 METTL26Q96S19 204 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 UBR2Q8IWV8 1755 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 SMCHD1A6NHR9 2005 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 A0A087X0M5 115 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 A0A1B0GX30 115 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 PRF1P14222 555 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 SNRPEP62304 92 aaKnown RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 PIPOXQ9P0Z9 390 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 ANKRD33Q7Z3H0 272 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 RAB24Q969Q5 203 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 ZFP30Q9Y2G7 519 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 IGKV3D-11A0A0A0MRZ8 115 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 IGKV3-11P04433 115 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 SRD5A2P31213 254 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 GABRA6Q16445 453 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 MAP6Q96JE9 813 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 VAX2Q9UIW0 290 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 VDAC1P21796 283 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 OR1L8Q8NGR8 309 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 PRDM7Q9NQW5 492 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 PRNDQ9UKY0 176 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 PPP1R17O96001 155 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 TCTAP57738 103 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 COX19Q49B96 90 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 MRM1Q6IN84 353 aaKnown RBP5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 MOGAT3Q86VF5 341 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 MMP25Q9NPA2 562 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 CTAG2O75638 210 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 ABHD3Q8WU67 409 aa5.12□□□□□ -1.59
SRGAP1-201ENST00000355086 IGHV5-51A0A0C4DH38 117 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 FAM157CP0CG43 387 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 TFPI2P48307 235 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 FAM53AQ6NSI3 398 aaPredicted RBP5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 CLEC2AQ6UVW9 174 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 RTN4RQ9BZR6 473 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 R3HDM4Q96D70 268 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 PDFQ9HBH1 243 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 PLPP3O14495 311 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 CHST1O43916 411 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 HOXC4P09017 264 aaPredicted RBP5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 HLA-DRB3P79483 266 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 SPICQ8N5J4 248 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 STXBP6Q8NFX7 210 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 IFITM10A6NMD0 228 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 GALNSP34059 522 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 GUCA2BQ16661 112 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 ZNF738Q8NE65 137 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 FGF14Q92915 247 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 MPC1Q9Y5U8 109 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 AGFG2O95081 481 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 ZNF665Q9H7R5 613 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 PRSS50Q9UI38 385 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 SDK2Q58EX2 2172 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 CACNA1EQ15878 2313 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 LMX1BO60663 402 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 LRRC75AQ8NAA5 344 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 SFTPCP11686 197 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 METAP1P53582 386 aa5.11□□□□□ -1.59
SRGAP1-201ENST00000355086 MMDQ15546 238 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms