RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 MED13Q9UHV7 2174 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 ZNHIT1O43257 154 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 SYNGR1O43759 233 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 FBXO24O75426 580 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 TUSC2O75896 110 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 SLC34A2O95436 690 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 SCTP09683 121 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 GLI4P10075 376 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 F2RL1P55085 397 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 OR52M1Q8NGK5 317 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 OR4D5Q8NGN0 318 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 SPIN2AQ99865 258 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 SPIN2BQ9BPZ2 258 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 UBE2J1Q9Y385 318 aaPredicted RBP19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 ZNF407Q9C0G0 2248 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 TRIM77I1YAP6 450 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 IL32P24001 234 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 LPAR6P43657 344 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 SWI5Q1ZZU3 235 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 SPIN3Q5JUX0 258 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 BTNL8Q6UX41 500 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 MEX3BQ6ZN04 569 aaKnown RBP19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 TBC1D26Q86UD7 250 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 SMIM3Q9BZL3 60 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 ZDHHC11Q9H8X9 412 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 DNAJC13O75165 2243 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 DUXBA0A1W2PPF3 345 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 ARGFXA6NJG6 315 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 SEC11BP0C7V7 166 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 CD82P27701 267 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 ZNF695Q8IW36 515 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 SUMF2Q8NBJ7 301 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 SECTM1Q8WVN6 248 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 ERGIC1Q969X5 290 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 PARD6AQ9NPB6 346 aa19.03■□□□□ 0.64
NKX2-1-201ENST00000354822 ADCYAP1P18509 176 aa19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 SRSF3P84103 164 aaKnown RBP19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 MRPL49Q13405 166 aaKnown RBP19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 TGIF1Q15583 401 aa19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 MDP1Q86V88 176 aa19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 FAM58AQ8N1B3 248 aa19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 IFT22Q9H7X7 185 aa19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 SPRR3Q9UBC9 169 aa19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 LHX6Q9UPM6 363 aa19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 FREM2Q5SZK8 3169 aa19.02■□□□□ 0.64
NKX2-1-201ENST00000354822 PIGBOS1A0A0B4J2F0 54 aa19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 ZNF169Q14929 603 aaPredicted RBP19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 TSC22D1Q15714 1073 aa19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 TBC1D28Q2M2D7 210 aa19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 CMTM1Q8IZ96 169 aa19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 PUSL1Q8N0Z8 303 aaKnown RBP19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 GMPPAQ96IJ6 420 aaPredicted RBP19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 ABHD14BQ96IU4 210 aa19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 GLRX2Q9NS18 164 aa19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 IL36RNQ9UBH0 155 aa19.02■□□□□ 0.63
NKX2-1-201ENST00000354822 WDFY4Q6ZS81 3184 aa19.01■□□□□ 0.63
NKX2-1-201ENST00000354822 SNAPINO95295 136 aa19.01■□□□□ 0.63
NKX2-1-201ENST00000354822 CLRN3Q8NCR9 226 aa19.01■□□□□ 0.63
NKX2-1-201ENST00000354822 LYPD6BQ8NI32 183 aa19.01■□□□□ 0.63
NKX2-1-201ENST00000354822 GINS3Q9BRX5 216 aa19.01■□□□□ 0.63
NKX2-1-201ENST00000354822 OR51I2Q9H344 312 aa19.01■□□□□ 0.63
NKX2-1-201ENST00000354822 PURGQ9UJV8 347 aaKnown RBP19.01■□□□□ 0.63
NKX2-1-201ENST00000354822 ARHGAP21Q5T5U3 1957 aa19.01■□□□□ 0.63
NKX2-1-201ENST00000354822 TOR1AO14656 332 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 PVALBP20472 110 aaPredicted RBP19■□□□□ 0.63
NKX2-1-201ENST00000354822 HERPUD1Q15011 391 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 ZNF818PQ6ZRF7 136 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 GAPTQ8N292 157 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 DEFB124Q8NES8 71 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 DMBX1Q8NFW5 382 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 MRPL30Q8TCC3 161 aaKnown RBP19■□□□□ 0.63
NKX2-1-201ENST00000354822 RCL1Q9Y2P8 373 aaKnown RBP19■□□□□ 0.63
NKX2-1-201ENST00000354822 FAM74A7A6NL05 159 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 RNASEK-C17orf49H0YIS7 233 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 S100GP29377 79 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 NUBP1P53384 320 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 TGFBR3Q03167 851 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 FAM74A3Q4VXF1 159 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 RNFT1Q5M7Z0 435 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 OR2T2Q6IF00 324 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 SELENOHQ8IZQ5 122 aaKnown RBP19■□□□□ 0.63
NKX2-1-201ENST00000354822 TLNRD1Q9H1K6 362 aa19■□□□□ 0.63
NKX2-1-201ENST00000354822 HSPB6O14558 160 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 RAB5CP51148 216 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 GUCA2BQ16661 112 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 ZNF880Q6PDB4 577 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 Q6ZRG5 221 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 NRIP2Q9BQI9 281 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 PLA2G2EQ9NZK7 142 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 NKX2-6A6NCS4 301 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 J3QT63 122 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 FTH1P19P0C7X4 201 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 MUC1P15941 1255 aaPredicted RBP18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 CA6P23280 308 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 UCP1P25874 307 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 NKX2-1P43699 371 aaPredicted RBP18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 ATP1A1-AS1Q5TC04 95 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 FAM122CQ6P4D5 195 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 P4HA3Q7Z4N8 544 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 COMMD1Q8N668 190 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms