RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 C2orf76Q3KRA6 126 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 CST9LP1Q5W188 147 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF101Q8IZC7 436 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 SLC25A44Q96H78 314 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-203ENST00000354674 OR10C1Q96KK4 312 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 DCBLD2Q96PD2 775 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 XKRY2A2RUG3 117 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 FAM221AA4D161 298 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 CXCL13O43927 109 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF43P17038 809 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 GALP22466 123 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 PMELP40967 661 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 BIDP55957 195 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 LRRC69Q6ZNQ3 347 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 LYG2Q86SG7 212 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF283Q8N7M2 679 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 RAB40AQ8WXH6 277 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 SLC35B3Q9H1N7 401 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 SPRR3Q9UBC9 169 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 TRGV5A0A0B4J1U4 118 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 IGHV3-15A0A0B4J1V0 119 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 DFFBO76075 338 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 LINC00614P0C842 121 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 OR5H8P0DN80 308 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF133P52736 654 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-203ENST00000354674 FJX1Q86VR8 437 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 BEND2Q8NDZ0 799 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 IL22RA2Q969J5 263 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 MALSU1Q96EH3 234 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 WDYHV1Q96HA8 205 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 TAAR6Q96RI8 345 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 CNN2Q99439 309 aaKnown RBP8.75□□□□□ -1.01
SYNE1-203ENST00000354674 DEFB127Q9H1M4 99 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 MYOZ1Q9NP98 299 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-203ENST00000354674 FBXL17Q9UF56 701 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 ARHGAP21Q5T5U3 1957 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 DUS4LO95620 317 aaKnown RBP8.75□□□□□ -1.01
SYNE1-203ENST00000354674 GSTP1P09211 210 aaKnown RBP8.75□□□□□ -1.01
SYNE1-203ENST00000354674 OR2T7P0C7T2 308 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 CTLA4P16410 223 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 CHATP28329 748 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 THBS4P35443 961 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 EIF1AXP47813 144 aaKnown RBP8.75□□□□□ -1.01
SYNE1-203ENST00000354674 TAS2R43P59537 309 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 TMEM182Q6ZP80 229 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-203ENST00000354674 WFDC8Q8IUA0 241 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF676Q8N7Q3 588 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 OR2T27Q8NH04 317 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 OR5R1Q8NH85 324 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 TP53RKQ96S44 253 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 SRA1Q9HD15 236 aaKnown RBP8.75□□□□□ -1.01
SYNE1-203ENST00000354674 SLC17A5Q9NRA2 495 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 RNF150Q9ULK6 438 aa8.75□□□□□ -1.01
SYNE1-203ENST00000354674 IGKV3D-15A0A087WSY6 115 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 A8MXE2 369 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 ZBTB25P24278 435 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 CHRNB4P30926 498 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 BRS3P32247 399 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 RAB7AP51149 207 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 ERVFC1-1P60608 527 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 TLE4Q04727 773 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 SLC16A9Q7RTY1 509 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 TMEM123Q8N131 208 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 NOXO1Q8NFA2 376 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 TMEM54Q969K7 222 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 ABHD17AQ96GS6 310 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF845Q96IR2 970 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-203ENST00000354674 EMC6Q9BV81 110 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 SPENQ96T58 3664 aaKnown RBP8.74□□□□□ -1.01
SYNE1-203ENST00000354674 SLC16A7O60669 478 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 IGHG1P01857 330 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 CD55P08174 381 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 HRH1P35367 487 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 TAS2R19P59542 299 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 MMDQ15546 238 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 ANGPTL5Q86XS5 388 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 C1QL4Q86Z23 238 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 SLC35F2Q8IXU6 374 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 OR10A7Q8NGE5 316 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 RNF128Q8TEB7 428 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 TSEN15Q8WW01 171 aaKnown RBP8.74□□□□□ -1.01
SYNE1-203ENST00000354674 ERGIC1Q969X5 290 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 SAT2Q96F10 170 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-203ENST00000354674 PRDM14Q9GZV8 571 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 GLRX2Q9NS18 164 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 FOXD3Q9UJU5 478 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-203ENST00000354674 FLVCR1Q9Y5Y0 555 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 BSNQ9UPA5 3926 aa8.74□□□□□ -1.01
SYNE1-203ENST00000354674 IGKV1D-43A0A0B4J1Z2 117 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 NUDT19A8MXV4 375 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 C1QTNF9BB2RNN3 333 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 XRCC2O43543 280 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 KNG1P01042 644 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 C1QTNF9P0C862 333 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 FCGR2CP31995 323 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 COL10A1Q03692 680 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 LEMD1Q68G75 181 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 SLC25A47Q6Q0C1 308 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 ADGRE4PQ86SQ3 457 aa8.73□□□□□ -1.01
SYNE1-203ENST00000354674 CDC20BQ86Y33 519 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms