RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 OR4S2Q8NH73 311 aa12.96□□□□□ -0.34
COL17A1-201ENST00000353479 OR2V2Q96R30 315 aa12.96□□□□□ -0.34
COL17A1-201ENST00000353479 WIPI2Q9Y4P8 454 aa12.96□□□□□ -0.34
COL17A1-201ENST00000353479 ANKRD36A6QL64 1941 aa12.96□□□□□ -0.34
COL17A1-201ENST00000353479 MT-ND4LP03901 98 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 C1orf174Q8IYL3 243 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 SAT2Q96F10 170 aaPredicted RBP12.95□□□□□ -0.34
COL17A1-201ENST00000353479 HDHD3Q9BSH5 251 aaPredicted RBP12.95□□□□□ -0.34
COL17A1-201ENST00000353479 PLSCR3Q9NRY6 295 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 ZNF835Q9Y2P0 537 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 PRSS44E7EML9 344 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 ADAM10O14672 748 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 GAPTQ8N292 157 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 CCL28Q9NRJ3 127 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 CISD1Q9NZ45 108 aaKnown RBP12.95□□□□□ -0.34
COL17A1-201ENST00000353479 LSM2Q9Y333 95 aaKnown RBP12.95□□□□□ -0.34
COL17A1-201ENST00000353479 URGCP-MRPS24S4R325 110 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 MGAMO43451 1857 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 ARPC4-TTLL3A0A0A6YYG9 625 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 C9orf172C9J069 976 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 RPL36A-HNRNPH2H7BZ11 118 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 IGF2P01344 180 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 SLC25A4P12235 298 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 SUCLG1P53597 346 aaKnown RBP12.95□□□□□ -0.34
COL17A1-201ENST00000353479 HLA-DRB3P79483 266 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 ROM1Q03395 351 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 H3F3CQ6NXT2 135 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 RPUSD4Q96CM3 377 aaKnown RBP12.95□□□□□ -0.34
COL17A1-201ENST00000353479 ADTRPQ96IZ2 230 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 UQCC1Q9NVA1 299 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 FKBP11Q9NYL4 201 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 SLC25A10Q9UBX3 287 aaPredicted RBP12.95□□□□□ -0.34
COL17A1-201ENST00000353479 A0A0G2JMM0 328 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 A0A1W2PPB8 328 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 A0A1W2PRS3 328 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 KIR3DP1A8MWS1 328 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 PPYP01298 95 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 RP1P56715 2156 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 RBM11P57052 281 aaKnown RBP12.95□□□□□ -0.34
COL17A1-201ENST00000353479 UBE2G2P60604 165 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 TNXAQ16473 311 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 RAB40CQ96S21 281 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 CA10Q9NS85 328 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 CCDC88CQ9P219 2028 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 TIMM9Q9Y5J7 89 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 OR4A8P0C604 315 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 COX6B1P14854 86 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 CBR1P16152 277 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 PRDX2P32119 198 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 GPR6P46095 362 aaPredicted RBP12.95□□□□□ -0.34
COL17A1-201ENST00000353479 RIPPLY2Q5TAB7 128 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 ACSM6Q6P461 480 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 OR2T6Q8NHC8 308 aa12.95□□□□□ -0.34
COL17A1-201ENST00000353479 DNAJC13O75165 2243 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 ADAP1O75689 374 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 GYPAP02724 150 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 CD37P11049 281 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 RAG2P55895 527 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 SNAI3Q3KNW1 292 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 SPICQ8N5J4 248 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 IMMP1LQ96LU5 166 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 KPTNQ9Y664 436 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 SLC38A11Q08AI6 406 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 LINC00596Q86U02 117 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 KDF1Q8NAX2 398 aaPredicted RBP12.94□□□□□ -0.34
COL17A1-201ENST00000353479 RXFP4Q8TDU9 374 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 ABHD17AQ96GS6 310 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 RNF122Q9H9V4 155 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 F2RL2O00254 374 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 LMX1BO60663 402 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 ZBTB37Q5TC79 503 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 TPRX1Q8N7U7 411 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 R3HDM4Q96D70 268 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 FAM24AA6NFZ4 105 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 HSBP1L1C9JCN9 74 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 ITLN1Q8WWA0 313 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 AP1S3Q96PC3 154 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 CCL13Q99616 98 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 SFXN3Q9BWM7 321 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 HEXA-AS1Q9H8Q6 139 aa12.94□□□□□ -0.34
COL17A1-201ENST00000353479 TMEM229AB2RXF0 380 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 UMAD1C9J7I0 102 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 ATP6V1G2-DDX39BF2Z307 99 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 CD59P13987 128 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 MARVELD1Q9BSK0 173 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 SPTBN2O15020 2390 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 CNOT1A5YKK6 2376 aaKnown RBP12.93□□□□□ -0.34
COL17A1-201ENST00000353479 RAMP1O60894 148 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 THY1P04216 161 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 CSRP1P21291 193 aaKnown RBP12.93□□□□□ -0.34
COL17A1-201ENST00000353479 BRS3P32247 399 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 OR2B8PP59922 312 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 TEX30Q5JUR7 227 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 DBX2Q6ZNG2 339 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 ZNF727A8MUV8 499 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 CD1AP06126 327 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 RPL31P62899 125 aaKnown RBP12.93□□□□□ -0.34
COL17A1-201ENST00000353479 CLEC18BQ6UXF7 455 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 ZNF826PQ6ZT77 177 aa12.93□□□□□ -0.34
COL17A1-201ENST00000353479 ZNF680Q8NEM1 530 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms