RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ODF3L1Q8IXM7 274 aa21.08■□□□□ 0.97
CPNE1-202ENST00000352393 ZNF565Q8N9K5 539 aa21.08■□□□□ 0.97
CPNE1-202ENST00000352393 CLEC18CQ8NCF0 446 aa21.08■□□□□ 0.97
CPNE1-202ENST00000352393 ABHD14AQ9BUJ0 271 aa21.08■□□□□ 0.97
CPNE1-202ENST00000352393 PAPOLGQ9BWT3 736 aaKnown RBP21.08■□□□□ 0.97
CPNE1-202ENST00000352393 SLC25A31Q9H0C2 315 aa21.08■□□□□ 0.97
CPNE1-202ENST00000352393 GLRX2Q9NS18 164 aa21.08■□□□□ 0.97
CPNE1-202ENST00000352393 TMEM265A0A087WTH1 108 aa21.08■□□□□ 0.96
CPNE1-202ENST00000352393 RFPL3SP0C7P2 107 aa21.08■□□□□ 0.96
CPNE1-202ENST00000352393 SP5Q6BEB4 398 aaPredicted RBP21.08■□□□□ 0.96
CPNE1-202ENST00000352393 ZNF818PQ6ZRF7 136 aa21.08■□□□□ 0.96
CPNE1-202ENST00000352393 COLCA1Q6ZS62 124 aa21.08■□□□□ 0.96
CPNE1-202ENST00000352393 DUXBA0A1W2PPF3 345 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 BTBD17A6NE02 478 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 RBFOX3A6NFN3 312 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 CDRT15L2A8MXV6 281 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 PROB1E7EW31 1015 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 ADAM20O43506 726 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 CLDN15P56746 228 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 NMSQ5H8A3 153 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 ADAM5Q6NVV9 412 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 WDR5BQ86VZ2 330 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 C1QL4Q86Z23 238 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 CPEB3Q8NE35 698 aaKnown RBP21.07■□□□□ 0.96
CPNE1-202ENST00000352393 BCL3P20749 454 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 FOLR3P41439 243 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 CXorf66Q5JRM2 361 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-202ENST00000352393 C5orf24Q7Z6I8 188 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 ZFP62Q8NB50 900 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-202ENST00000352393 TCEAL3Q969E4 200 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 SIGLEC12Q96PQ1 595 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 FGF23Q9GZV9 251 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-202ENST00000352393 KIAA1456Q9P272 454 aa21.07■□□□□ 0.96
CPNE1-202ENST00000352393 PUS1Q9Y606 427 aaKnown RBP eCLIP21.07■□□□□ 0.96
CPNE1-202ENST00000352393 CFAP54Q96N23 3096 aa21.06■□□□□ 0.96
CPNE1-202ENST00000352393 TUSC2O75896 110 aa21.06■□□□□ 0.96
CPNE1-202ENST00000352393 TK1P04183 234 aa21.06■□□□□ 0.96
CPNE1-202ENST00000352393 OMGP23515 440 aa21.06■□□□□ 0.96
CPNE1-202ENST00000352393 HERPUD1Q15011 391 aa21.06■□□□□ 0.96
CPNE1-202ENST00000352393 SPIN3Q5JUX0 258 aa21.06■□□□□ 0.96
CPNE1-202ENST00000352393 GAPTQ8N292 157 aa21.06■□□□□ 0.96
CPNE1-202ENST00000352393 PLPPR1Q8TBJ4 325 aa21.06■□□□□ 0.96
CPNE1-202ENST00000352393 MAGT1Q9H0U3 335 aa21.06■□□□□ 0.96
CPNE1-202ENST00000352393 IGKV1D-13A0A0B4J2D9 117 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 ZNF732B4DXR9 585 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 CYTIPO60759 359 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 IGKV1-13P0DP09 117 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 UCP1P25874 307 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 OR2B8PP59922 312 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 VAMP2P63027 116 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 FOXO1Q12778 655 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 WIPI1Q5MNZ9 446 aaPredicted RBP21.05■□□□□ 0.96
CPNE1-202ENST00000352393 OR5C1Q8NGR4 320 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 SLAMF9Q96A28 289 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 PILRBQ9UKJ0 227 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 SLC22A20A6NK97 555 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 LINC00587B1AMM8 73 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 AP4M1O00189 453 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 NTN3O00634 580 aaPredicted RBP21.05■□□□□ 0.96
CPNE1-202ENST00000352393 OR2C1O95371 312 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 TMEM50AO95807 157 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 FABP1P07148 127 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 SCTP09683 121 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 MMP9P14780 707 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 FGF12P61328 243 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 HEPN1Q6WQI6 88 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 OR56B2PQ8NGI1 322 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 ABHD3Q8WU67 409 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 GSN-AS1Q9NRJ2 163 aa21.05■□□□□ 0.96
CPNE1-202ENST00000352393 HSPA12AO43301 675 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 NQO2P16083 231 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 DYNLT3P51808 116 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 ID3Q02535 119 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 BAXQ07812 192 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 TRA2AQ13595 282 aaKnown RBP eCLIP21.04■□□□□ 0.96
CPNE1-202ENST00000352393 SAXO1Q8IYX7 474 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 SRP19P09132 144 aaKnown RBP21.04■□□□□ 0.96
CPNE1-202ENST00000352393 NRN1LQ496H8 165 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 TMEM45BQ96B21 275 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 MUCL1Q96DR8 90 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 HS3ST6Q96QI5 342 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 UNKLQ9H9P5 680 aaKnown RBP21.04■□□□□ 0.96
CPNE1-202ENST00000352393 CRIM1Q9NZV1 1036 aa21.04■□□□□ 0.96
CPNE1-202ENST00000352393 TNRC6AQ8NDV7 1962 aaKnown RBP21.03■□□□□ 0.96
CPNE1-202ENST00000352393 CLN5O75503 358 aa21.03■□□□□ 0.96
CPNE1-202ENST00000352393 EPHA1P21709 976 aa21.03■□□□□ 0.96
CPNE1-202ENST00000352393 VDAC1P21796 283 aa21.03■□□□□ 0.96
CPNE1-202ENST00000352393 ZFP36L1Q07352 338 aaKnown RBP21.03■□□□□ 0.96
CPNE1-202ENST00000352393 PRDX4Q13162 271 aa21.03■□□□□ 0.96
CPNE1-202ENST00000352393 PMS2CLQ68D20 193 aa21.03■□□□□ 0.96
CPNE1-202ENST00000352393 GNPNAT1Q96EK6 184 aaPredicted RBP21.03■□□□□ 0.96
CPNE1-202ENST00000352393 ZNF845Q96IR2 970 aaPredicted RBP21.03■□□□□ 0.96
CPNE1-202ENST00000352393 GPHA2Q96T91 129 aa21.03■□□□□ 0.96
CPNE1-202ENST00000352393 NIT2Q9NQR4 276 aa21.03■□□□□ 0.96
CPNE1-202ENST00000352393 CEACAM1P13688 526 aa21.02■□□□□ 0.96
CPNE1-202ENST00000352393 Q0VFX4 171 aa21.02■□□□□ 0.96
CPNE1-202ENST00000352393 CPNE4Q96A23 557 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-202ENST00000352393 REPIN1Q9BWE0 567 aaKnown RBP21.02■□□□□ 0.96
CPNE1-202ENST00000352393 PRO3102Q9H379 93 aa21.02■□□□□ 0.96
CPNE1-202ENST00000352393 H3BQ15 152 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms