RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 OPN1MWP04001 364 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 OPN1MW2P0DN77 364 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 OPN1MW3P0DN78 364 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 GLB1P16278 677 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 MYBPHQ13203 477 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 PPA1Q15181 289 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 CARD17Q5XLA6 110 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 ANKRD37Q7Z713 158 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 DYRK2Q92630 601 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 ADGRG7Q96K78 797 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 TP53RKQ96S44 253 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 SYT3Q9BQG1 590 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 PLEKHF2Q9H8W4 249 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 SDK2Q58EX2 2172 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 TRBV11-1A0A0K0K1C0 115 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 M0R143 59 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 NKX2-1P43699 371 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-202ENST00000348987 GABREP78334 506 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 PAX5Q02548 391 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 CLN3Q13286 438 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 KLRF1Q9NZS2 232 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 ZNF732B4DXR9 585 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 PNRC1Q12796 327 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-202ENST00000348987 TEX38Q6PEX7 206 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 BRICD5Q6PL45 260 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 NECAP1Q8NC96 275 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 SDF2L1Q9HCN8 221 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 LRFN1Q9P244 771 aa16.14■□□□□ 0.17
SCARF1-202ENST00000348987 VSTM2BA6NLU5 285 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 TK1P04183 234 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 CCL1P22362 96 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 TUBG1P23258 451 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 PCP4P48539 62 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 TDGF1P3P51864 188 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 RTL6Q6ICC9 239 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 ODF3L1Q8IXM7 274 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 OR10G3Q8NGC4 313 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 OR5L2Q8NGL0 311 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 MRPL13Q9BYD1 178 aaKnown RBP16.13■□□□□ 0.17
SCARF1-202ENST00000348987 SRD5A3Q9H8P0 318 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 CBY1Q9Y3M2 126 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 CA11O75493 328 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 NXPH3O95157 252 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 HBE1P02100 147 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 FAHP16930 419 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 CXorf66Q5JRM2 361 aaPredicted RBP16.13■□□□□ 0.17
SCARF1-202ENST00000348987 DTX1Q86Y01 620 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 C20orf196Q8IYI0 205 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 CADM4Q8NFZ8 388 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 POC1BQ8TC44 478 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 DNASE2BQ8WZ79 361 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 DDIT4LQ96D03 193 aa16.13■□□□□ 0.17
SCARF1-202ENST00000348987 GNPNAT1Q96EK6 184 aaPredicted RBP16.13■□□□□ 0.17
SCARF1-202ENST00000348987 LYRM2Q9NU23 88 aaPredicted RBP16.13■□□□□ 0.17
SCARF1-202ENST00000348987 RAB35Q15286 201 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 ZNF66Q6ZN08 573 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 THNSL2Q86YJ6 484 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 NOXO1Q8NFA2 376 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 OR10G4Q8NGN3 311 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 LYZL4Q96KX0 146 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 SEMA5BQ9P283 1151 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 IL17BQ9UHF5 180 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 SHANK1Q9Y566 2161 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 RAB4AP20338 218 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 PI4KAP42356 2102 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 PMS2P11Q13670 270 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 CLEC12BQ2HXU8 276 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 RSPO4Q2I0M5 234 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-202ENST00000348987 RHBDD2Q6NTF9 364 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 SLC25A26Q70HW3 274 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 TMEM208Q9BTX3 173 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 ZNF665Q9H7R5 613 aa16.12■□□□□ 0.17
SCARF1-202ENST00000348987 AKIRIN1Q9H9L7 192 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-202ENST00000348987 IFNL4K9M1U5 179 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 TNFSF12O43508 249 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 VAMP2P63027 116 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 ZNF154Q13106 437 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 R3HDM4Q96D70 268 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 PNRC2Q9NPJ4 139 aaKnown RBP16.11■□□□□ 0.17
SCARF1-202ENST00000348987 LAMP3Q9UQV4 416 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 GOLT1BQ9Y3E0 138 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 CACNA1EQ15878 2313 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 OR2J2O76002 312 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 TMEM50AO95807 157 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 NPSP0C0P6 89 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 CLRN1P58418 232 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 MRPL41Q8IXM3 137 aaKnown RBP16.11■□□□□ 0.17
SCARF1-202ENST00000348987 Q96M66 194 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 OR6C1Q96RD1 312 aa16.11■□□□□ 0.17
SCARF1-202ENST00000348987 ADAMTS9Q9P2N4 1935 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 A6NNC1 897 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 ANGPTL7O43827 346 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 PTGDSP41222 190 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 ERVFC1-1P60608 527 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 ERVS71-1P61550 626 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 PLPPR5Q32ZL2 321 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 PGAM5Q96HS1 289 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 ALKBH4Q9NXW9 302 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 KLHL13Q9P2N7 655 aa16.1■□□□□ 0.17
SCARF1-202ENST00000348987 VAX2Q9UIW0 290 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms